Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC079753.1-201ENST00000623243 3868 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC073343.1-201ENST00000328239 651 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 RPL7P26-201ENST00000333817 754 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 NFIB-202ENST00000380924 840 ntTSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 RNY4P36-201ENST00000391116 96 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 RNU6-1158P-201ENST00000391167 107 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 RNU6-985P-201ENST00000410182 104 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 MTCYBP10-201ENST00000424905 650 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 DPY19L1P2-201ENST00000426647 915 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 MTATP8P1-201ENST00000467115 207 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC135999.1-201ENST00000478962 479 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 PGAM1P13-201ENST00000507497 754 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AL163153.1-201ENST00000554223 283 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC009117.1-201ENST00000563948 554 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC078899.5-201ENST00000612475 178 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 Z69720.2-201ENST00000624755 279 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC062029.1-202ENST00000606164 3651 ntBASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 AC104118.1-201ENST00000607625 1589 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC022905.1-201ENST00000503430 3048 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 OR11H4-201ENST00000315409 1082 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 NACAP2-201ENST00000318548 624 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 RNA5SP319-201ENST00000362768 119 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 RN7SKP6-201ENST00000364795 319 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC005042.1-201ENST00000393397 800 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 MAST4-207ENST00000407621 559 ntTSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 OR51A3P-201ENST00000413596 924 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 CYCSP12-201ENST00000437729 300 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 BX248409.1-201ENST00000455497 255 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 MTCO1P42-201ENST00000457379 726 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 ACA64.4-201ENST00000459070 127 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AL355032.1-201ENST00000472981 438 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 MRPS35P2-201ENST00000508242 191 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC107222.1-201ENST00000510899 637 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 RNA5SP135-201ENST00000517019 125 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 HMGN2P6-201ENST00000551091 273 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 OR4H6P-201ENST00000563771 921 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AL390726.5-202ENST00000564800 256 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AL390240.1-201ENST00000612950 384 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC234782.5-201ENST00000617723 324 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC068870.2-201ENST00000620635 389 ntBASIC7.37□□□□□ -1.23
RC3H1Q5TC82 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC7.37□□□□□ -1.23
RC3H1Q5TC82 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms