Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 U3.11-201ENST00000364476 212 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 Y_RNA.261-201ENST00000364631 102 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 RNA5SP172-201ENST00000365061 118 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 SUMO2P13-201ENST00000403109 272 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL445189.1-201ENST00000405722 338 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 RN7SKP205-201ENST00000410999 307 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC079807.1-201ENST00000429993 481 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL389925.1-201ENST00000432257 728 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 RPS18P1-201ENST00000447840 458 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL031274.1-201ENST00000450334 232 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL445991.1-201ENST00000450381 475 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 SCARNA18-201ENST00000459004 134 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 RN7SL393P-201ENST00000463588 296 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC011476.1-201ENST00000466725 307 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 RN7SL390P-201ENST00000470634 284 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC114324.2-202ENST00000503812 134 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC093816.1-201ENST00000515076 913 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 IGKV2D-38-201ENST00000518423 240 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC007537.1-201ENST00000539347 327 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL359881.1-201ENST00000602916 267 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 AL138889.2-201ENST00000603883 242 ntBASIC7.42□□□□□ -1.22
VARS2Q5ST30 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
VARS2Q5ST30 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARS2Q5ST30 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AP001157.1-201ENST00000550837 2339 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VARS2Q5ST30 CDY11P-201ENST00000447168 1651 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARS2Q5ST30 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC107081.3-201ENST00000612715 2034 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARS2Q5ST30 Y_RNA.16-201ENST00000362421 102 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 RNA5SP382-201ENST00000363355 112 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 Y_RNA.233-201ENST00000364407 101 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 RNU6-898P-201ENST00000365627 104 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 MT-TP-201ENST00000387461 68 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 RNU2-52P-201ENST00000410680 190 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 RPSAP60-201ENST00000415403 880 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC000089.1-201ENST00000424559 801 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 RPL7P46-201ENST00000425129 740 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 RPL23AP69-201ENST00000431134 458 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 RPS7P5-201ENST00000441482 581 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC099670.1-201ENST00000455141 783 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC094085.1-201ENST00000468914 584 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 RN7SL101P-201ENST00000496350 279 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 TBCAP3-201ENST00000512475 312 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC093878.1-201ENST00000515630 432 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 RN7SL753P-201ENST00000581238 290 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 AC011471.4-201ENST00000638271 216 ntBASIC7.41□□□□□ -1.22
VARS2Q5ST30 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
VARS2Q5ST30 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VARS2Q5ST30 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
VARS2Q5ST30 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms