Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 OR4K6P-201ENST00000416478 897 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AL807761.1-201ENST00000417622 171 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 USP9YP9-201ENST00000429406 715 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 RPL36P19-201ENST00000430744 301 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 TDGF1P1-201ENST00000445734 527 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC010733.1-201ENST00000451515 401 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 ATG12P2-201ENST00000456830 416 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 RNA5SP103-201ENST00000459503 118 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC010468.1-201ENST00000461022 817 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 RPS29P22-201ENST00000472363 168 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 RPL21P103-201ENST00000479921 488 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 BET1P1-201ENST00000482276 359 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC108043.1-201ENST00000512696 574 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC093249.4-201ENST00000564755 259 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC113194.1-201ENST00000606037 500 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 MIR7703-201ENST00000620784 77 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC012414.7-202ENST00000622705 1090 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 MIR3974-201ENST00000637126 96 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AL133412.1-201ENST00000380194 2992 ntBASIC5.45□□□□□ -1.54
LONRF3Q496Y0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC005261.4-201ENST00000600047 1385 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC099654.2-201ENST00000433031 1980 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 RNU1-83P-201ENST00000363426 164 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 SNORD116.1-201ENST00000365628 92 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 RNU6-444P-201ENST00000383988 108 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 ERHP2-201ENST00000402323 299 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 ARL4AP5-201ENST00000404372 599 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL590084.1-201ENST00000407885 387 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL645608.4-201ENST00000423619 154 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 UBE2V1P1-201ENST00000430836 445 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL008629.1-201ENST00000438615 184 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL117351.1-201ENST00000438864 766 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 H2AFZP5-201ENST00000446960 382 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 RPS3AP22-201ENST00000488297 769 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 RNU5A-4P-201ENST00000516588 111 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 RN7SKP234-201ENST00000517173 224 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AP000926.4-201ENST00000527351 454 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC124068.1-201ENST00000563131 678 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 MIR4270-201ENST00000581799 70 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL109653.1-201ENST00000603091 248 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL133507.1-201ENST00000605269 557 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL161616.1-201ENST00000611867 286 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC131159.1-201ENST00000621854 213 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AC068620.4-201ENST00000636730 1182 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 MIR1322-201ENST00000638013 71 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL596275.2-204ENST00000641628 552 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL596275.2-206ENST00000641957 626 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 AL355852.1-201ENST00000454081 1771 ntBASIC5.44□□□□□ -1.54
LONRF3Q496Y0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LONRF3Q496Y0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms