Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AL590392.1-201ENST00000604960 446 ntBASIC3.03□□□□□ -1.92
HMGN3Q15651 RNU1-30P-201ENST00000606575 163 ntBASIC3.03□□□□□ -1.92
HMGN3Q15651 AC023813.4-201ENST00000607580 580 ntBASIC3.03□□□□□ -1.92
HMGN3Q15651 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 XIST_intron.1-201ENST00000619444 68 ntBASIC3.03□□□□□ -1.92
HMGN3Q15651 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 AL354798.1-201ENST00000622505 329 ntBASIC3.03□□□□□ -1.92
HMGN3Q15651 C2orf27A-204ENST00000623058 969 ntBASIC3.03□□□□□ -1.92
HMGN3Q15651 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HMGN3Q15651 AC009452.1-201ENST00000640823 606 ntBASIC3.03□□□□□ -1.92
HMGN3Q15651 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HMGN3Q15651 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGN3Q15651 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGN3Q15651 AP004289.2-201ENST00000444413 1457 ntBASIC3.03□□□□□ -1.93
HMGN3Q15651 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.03□□□□□ -1.93
HMGN3Q15651 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
HMGN3Q15651 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HMGN3Q15651 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN3Q15651 SEPT7P7-201ENST00000420492 1301 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 RNA5SP235-201ENST00000365411 114 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC068538.1-201ENST00000376856 336 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HMGN3Q15651 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN3Q15651 MIR30B-201ENST00000384850 88 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC093578.1-201ENST00000415219 368 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 PTP4A1P1-201ENST00000420539 515 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 GLRXP1-201ENST00000423261 334 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 FAR1P1-201ENST00000427163 934 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN3Q15651 MRPS18BP2-201ENST00000434310 759 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC074367.1-201ENST00000438685 1125 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC010655.1-201ENST00000449336 292 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC009220.1-201ENST00000451614 275 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 VN1R105P-201ENST00000486595 910 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 FCF1P3-201ENST00000496394 590 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN3Q15651 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 AC053481.4-201ENST00000583164 216 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 MIR5187-201ENST00000583479 76 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGN3Q15651 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGN3Q15651 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGN3Q15651 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC000123.2-201ENST00000623124 461 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 AC110801.1-201ENST00000623590 212 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 RNA5SP196-201ENST00000625967 102 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGN3Q15651 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN3Q15651 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN3Q15651 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN3Q15651 AC073073.2-201ENST00000609827 2578 ntBASIC3.02□□□□□ -1.93
HMGN3Q15651 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGN3Q15651 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN3Q15651 AC090229.1-201ENST00000590983 1609 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN3Q15651 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGN3Q15651 MIR30E-201ENST00000362104 92 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 U3.39-201ENST00000408569 239 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.01□□□□□ -1.93
HMGN3Q15651 HMGB3P23-201ENST00000414981 585 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN3Q15651 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN3Q15651 AL139247.1-201ENST00000422768 325 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 GTF2IP23-201ENST00000423746 351 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.01□□□□□ -1.93
HMGN3Q15651 BX890604.2-201ENST00000427883 474 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 RPS27AP12-201ENST00000429552 465 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 AL353597.2-202ENST00000434901 373 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN3Q15651 AL133162.1-201ENST00000463228 453 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 RPS20P21-201ENST00000466859 343 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 AP001086.1-201ENST00000494882 321 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 UBE2CP3-201ENST00000502715 450 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN3Q15651 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGN3Q15651 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN3Q15651 AP006245.1-201ENST00000522549 120 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN3Q15651 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.01□□□□□ -1.93
HMGN3Q15651 AGGF1P6-201ENST00000569213 976 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 RN7SL703P-201ENST00000578485 302 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 MIR4286-201ENST00000580651 93 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGN3Q15651 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HMGN3Q15651 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.01□□□□□ -1.93
HMGN3Q15651 AC083809.1-201ENST00000615051 472 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 MIR6875-201ENST00000617506 72 ntBASIC3.01□□□□□ -1.93
HMGN3Q15651 ZYXP1-201ENST00000617638 118 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms