Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC020661.2-201ENST00000560114 134 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.06□□□□□ -1.44
SOX4Q06945 AL513327.3-201ENST00000602618 469 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AC106900.2-201ENST00000604994 317 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AL161734.1-201ENST00000609720 557 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AC025574.2-201ENST00000615621 514 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 AL603758.1-201ENST00000618654 241 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX4Q06945 AP006248.2-201ENST00000623309 592 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.06□□□□□ -1.44
SOX4Q06945 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX4Q06945 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 UGT2B26P-201ENST00000508672 1613 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 ICE2P1-201ENST00000512800 1849 ntBASIC6.06□□□□□ -1.44
SOX4Q06945 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SOX4Q06945 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.06□□□□□ -1.44
SOX4Q06945 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 NMD3P1-201ENST00000439704 1488 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 Y_RNA.157-201ENST00000363638 102 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 RNU1-59P-201ENST00000364829 162 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SOX4Q06945 MIR506-201ENST00000384998 124 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 SNORA75.4-201ENST00000391278 119 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AL034374.1-201ENST00000406329 351 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 MIR1178-201ENST00000408396 91 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AL592293.2-201ENST00000422292 996 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX4Q06945 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.05□□□□□ -1.44
SOX4Q06945 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 CFL1P1-202ENST00000432948 411 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 CBX1P1-201ENST00000440184 427 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 RPS7P5-201ENST00000441482 581 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 RPL17P49-201ENST00000443728 411 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 MRPL50P4-201ENST00000446432 475 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 AL133445.1-201ENST00000467051 452 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AC100832.1-201ENST00000471945 383 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 RN7SL629P-201ENST00000489622 285 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 RPS4XP14-201ENST00000493072 781 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SOX4Q06945 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX4Q06945 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.05□□□□□ -1.44
SOX4Q06945 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 AC015720.2-201ENST00000567709 334 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX4Q06945 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX4Q06945 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 TPMTP1-201ENST00000592307 737 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AL133481.2-203ENST00000607558 139 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 U1.25-201ENST00000614085 162 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AL118522.2-201ENST00000616045 615 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 U1.34-201ENST00000618578 162 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 U1.31-201ENST00000620022 160 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 AC132068.1-201ENST00000623805 459 ntBASIC6.05□□□□□ -1.44
SOX4Q06945 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.05□□□□□ -1.44
SOX4Q06945 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.05□□□□□ -1.44
SOX4Q06945 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SOX4Q06945 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.05□□□□□ -1.44
SOX4Q06945 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SOX4Q06945 AC007159.1-201ENST00000566529 4706 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX4Q06945 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX4Q06945 AC010329.1-201ENST00000593903 8328 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 AL161912.4-201ENST00000623889 2468 ntBASIC6.04□□□□□ -1.44
SOX4Q06945 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX4Q06945 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.04□□□□□ -1.44
SOX4Q06945 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SOX4Q06945 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SOX4Q06945 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms