Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC007000.2-201ENST00000442564 487 ntBASIC4.03□□□□□ -1.76
CBX1P83916 AC006326.1-201ENST00000445465 787 ntBASIC4.03□□□□□ -1.76
CBX1P83916 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 RPL23AP62-201ENST00000463396 453 ntBASIC4.03□□□□□ -1.76
CBX1P83916 AP002884.2-201ENST00000471647 395 ntBASIC4.03□□□□□ -1.76
CBX1P83916 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.03□□□□□ -1.76
CBX1P83916 RN7SL271P-201ENST00000487601 295 ntBASIC4.03□□□□□ -1.76
CBX1P83916 AL035404.1-201ENST00000497982 568 ntBASIC4.03□□□□□ -1.76
CBX1P83916 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.03□□□□□ -1.76
CBX1P83916 RNU6-362P-201ENST00000516736 90 ntBASIC4.03□□□□□ -1.76
CBX1P83916 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CBX1P83916 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CBX1P83916 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.03□□□□□ -1.76
CBX1P83916 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.03□□□□□ -1.76
CBX1P83916 AC090751.1-201ENST00000566966 267 ntBASIC4.03□□□□□ -1.76
CBX1P83916 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.03□□□□□ -1.76
CBX1P83916 AC010680.4-201ENST00000605334 543 ntBASIC4.03□□□□□ -1.76
CBX1P83916 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.03□□□□□ -1.76
CBX1P83916 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.03□□□□□ -1.76
CBX1P83916 MTND5P27-201ENST00000428871 1720 ntBASIC4.03□□□□□ -1.76
CBX1P83916 AC109780.1-201ENST00000451768 1344 ntBASIC4.02□□□□□ -1.77
CBX1P83916 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CBX1P83916 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CBX1P83916 AL590240.1-201ENST00000334118 313 ntBASIC4.02□□□□□ -1.77
CBX1P83916 RNA5SP123-201ENST00000363244 119 ntBASIC4.02□□□□□ -1.77
CBX1P83916 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CBX1P83916 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.02□□□□□ -1.77
CBX1P83916 HNRNPDP2-201ENST00000406475 478 ntBASIC4.02□□□□□ -1.77
CBX1P83916 RNA5SP293-201ENST00000410527 113 ntBASIC4.02□□□□□ -1.77
CBX1P83916 RNU2-6P-201ENST00000411404 190 ntBASIC4.02□□□□□ -1.77
CBX1P83916 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CBX1P83916 RPL23AP1-201ENST00000428990 471 ntBASIC4.02□□□□□ -1.77
CBX1P83916 AL358472.1-201ENST00000431295 329 ntBASIC4.02□□□□□ -1.77
CBX1P83916 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.02□□□□□ -1.77
CBX1P83916 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 AC073648.4-201ENST00000442655 781 ntBASIC4.02□□□□□ -1.77
CBX1P83916 ARL5AP2-201ENST00000444698 533 ntBASIC4.02□□□□□ -1.77
CBX1P83916 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.02□□□□□ -1.77
CBX1P83916 AC125238.1-201ENST00000448842 249 ntBASIC4.02□□□□□ -1.77
CBX1P83916 RPL23AP23-201ENST00000452590 471 ntBASIC4.02□□□□□ -1.77
CBX1P83916 AC096992.1-201ENST00000459808 709 ntBASIC4.02□□□□□ -1.77
CBX1P83916 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 AC010374.1-201ENST00000503762 1237 ntBASIC4.02□□□□□ -1.77
CBX1P83916 TXNP6-201ENST00000510190 310 ntBASIC4.02□□□□□ -1.77
CBX1P83916 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 COX6B1P6-201ENST00000522347 255 ntBASIC4.02□□□□□ -1.77
CBX1P83916 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.02□□□□□ -1.77
CBX1P83916 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 MIR4646-201ENST00000580775 63 ntBASIC4.02□□□□□ -1.77
CBX1P83916 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CBX1P83916 AC115621.1-201ENST00000604653 858 ntBASIC4.02□□□□□ -1.77
CBX1P83916 AC135178.6-201ENST00000605314 398 ntBASIC4.02□□□□□ -1.77
CBX1P83916 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.02□□□□□ -1.77
CBX1P83916 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.02□□□□□ -1.77
CBX1P83916 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
CBX1P83916 INTS6P1-201ENST00000504674 2530 ntBASIC4.02□□□□□ -1.77
CBX1P83916 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CBX1P83916 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.02□□□□□ -1.77
CBX1P83916 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CBX1P83916 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CBX1P83916 SRP72P2-201ENST00000344851 1979 ntBASIC4.02□□□□□ -1.77
CBX1P83916 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CBX1P83916 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CBX1P83916 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CBX1P83916 AC138393.1-206ENST00000540997 1886 ntBASIC4.01□□□□□ -1.77
CBX1P83916 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CBX1P83916 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CBX1P83916 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CBX1P83916 AL356057.1-202ENST00000402263 756 ntBASIC4.01□□□□□ -1.77
CBX1P83916 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CBX1P83916 MIR1303-201ENST00000408625 86 ntBASIC4.01□□□□□ -1.77
CBX1P83916 RPL17P36-201ENST00000420302 549 ntBASIC4.01□□□□□ -1.77
CBX1P83916 ARL2BPP3-201ENST00000421226 480 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AP000907.1-201ENST00000428428 510 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.01□□□□□ -1.77
CBX1P83916 MTCYBP31-201ENST00000438855 1122 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AL691517.1-201ENST00000440833 1235 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AC069540.1-201ENST00000446320 988 ntBASIC4.01□□□□□ -1.77
CBX1P83916 MTND2P6-201ENST00000455337 1030 ntBASIC4.01□□□□□ -1.77
CBX1P83916 DHFRP3-201ENST00000455595 559 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.01□□□□□ -1.77
CBX1P83916 AC053481.1-201ENST00000467217 306 ntBASIC4.01□□□□□ -1.77
CBX1P83916 NPM1P17-201ENST00000479221 602 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.01□□□□□ -1.77
CBX1P83916 ACTG1P13-201ENST00000486987 1043 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AC004453.1-201ENST00000487895 408 ntBASIC4.01□□□□□ -1.77
CBX1P83916 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.01□□□□□ -1.77
CBX1P83916 AC110792.2-201ENST00000510278 224 ntBASIC4.01□□□□□ -1.77
CBX1P83916 CIR1P1-201ENST00000524055 1133 ntBASIC4.01□□□□□ -1.77
CBX1P83916 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.01□□□□□ -1.77
CBX1P83916 AC093014.1-201ENST00000548926 724 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms