Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM6P62312 TPT1P12-201ENST00000448968 492 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM6P62312 MTCO3P20-201ENST00000454926 688 ntBASIC3.37□□□□□ -1.87
LSM6P62312 CYCSP53-201ENST00000455540 265 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 RPL7P48-201ENST00000461513 746 ntBASIC3.37□□□□□ -1.87
LSM6P62312 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM6P62312 AL049830.2-201ENST00000480072 201 ntBASIC3.37□□□□□ -1.87
LSM6P62312 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 TPT1P3-201ENST00000492841 512 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC021146.1-201ENST00000511202 716 ntBASIC3.37□□□□□ -1.87
LSM6P62312 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 FTH1P21-201ENST00000512179 511 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC108064.1-201ENST00000513791 460 ntBASIC3.37□□□□□ -1.87
LSM6P62312 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM6P62312 MIR2116-201ENST00000517221 80 ntBASIC3.37□□□□□ -1.87
LSM6P62312 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM6P62312 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.37□□□□□ -1.87
LSM6P62312 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM6P62312 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.37□□□□□ -1.87
LSM6P62312 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM6P62312 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 AC120057.2-201ENST00000571520 271 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM6P62312 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM6P62312 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.37□□□□□ -1.87
LSM6P62312 AL590392.1-201ENST00000604960 446 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 AL354760.1-201ENST00000608357 643 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC008121.2-201ENST00000614647 523 ntBASIC3.37□□□□□ -1.87
LSM6P62312 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
LSM6P62312 AC073530.2-201ENST00000623987 261 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AC091905.1-201ENST00000624400 311 ntBASIC3.37□□□□□ -1.87
LSM6P62312 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LSM6P62312 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 SEPT7P7-201ENST00000420492 1301 ntBASIC3.37□□□□□ -1.87
LSM6P62312 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 PRO1804-201ENST00000623780 2050 ntBASIC3.37□□□□□ -1.87
LSM6P62312 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM6P62312 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM6P62312 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM6P62312 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM6P62312 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
LSM6P62312 SPRR2C-201ENST00000290702 219 ntBASIC3.36□□□□□ -1.87
LSM6P62312 RNU6-213P-201ENST00000384051 104 ntBASIC3.36□□□□□ -1.87
LSM6P62312 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM6P62312 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.36□□□□□ -1.87
LSM6P62312 COX6CP17-201ENST00000421389 185 ntBASIC3.36□□□□□ -1.87
LSM6P62312 OR8F1P-201ENST00000425243 930 ntBASIC3.36□□□□□ -1.87
LSM6P62312 AL390879.2-203ENST00000426943 1121 ntBASIC3.36□□□□□ -1.87
LSM6P62312 HIGD1AP12-201ENST00000427832 281 ntBASIC3.36□□□□□ -1.87
LSM6P62312 CYCSP43-201ENST00000438233 310 ntBASIC3.36□□□□□ -1.87
LSM6P62312 RPS7P5-201ENST00000441482 581 ntBASIC3.36□□□□□ -1.87
LSM6P62312 AC245517.2-201ENST00000442890 346 ntBASIC3.36□□□□□ -1.87
LSM6P62312 MTCYBP21-201ENST00000443300 1113 ntBASIC3.36□□□□□ -1.87
LSM6P62312 AC006326.1-201ENST00000445465 787 ntBASIC3.36□□□□□ -1.87
LSM6P62312 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
LSM6P62312 TPMTP4-201ENST00000450749 678 ntBASIC3.36□□□□□ -1.87
LSM6P62312 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM6P62312 RN7SL93P-201ENST00000463035 293 ntBASIC3.36□□□□□ -1.87
LSM6P62312 RPS4XP15-201ENST00000489210 795 ntBASIC3.36□□□□□ -1.87
LSM6P62312 TRBV12-2-201ENST00000489763 344 ntBASIC3.36□□□□□ -1.87
LSM6P62312 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM6P62312 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LSM6P62312 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.36□□□□□ -1.87
LSM6P62312 PDCL2P2-201ENST00000533651 189 ntBASIC3.36□□□□□ -1.87
LSM6P62312 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM6P62312 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM6P62312 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM6P62312 AL133457.1-201ENST00000564251 987 ntBASIC3.36□□□□□ -1.87
LSM6P62312 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM6P62312 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM6P62312 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.36□□□□□ -1.87
LSM6P62312 AC018754.1-201ENST00000607486 925 ntBASIC3.36□□□□□ -1.87
LSM6P62312 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM6P62312 AL136295.6-201ENST00000610486 658 ntBASIC3.36□□□□□ -1.87
LSM6P62312 AC083809.1-201ENST00000615051 472 ntBASIC3.36□□□□□ -1.87
LSM6P62312 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM6P62312 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM6P62312 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LSM6P62312 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM6P62312 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM6P62312 NMD3P1-201ENST00000439704 1488 ntBASIC3.35□□□□□ -1.87
LSM6P62312 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LSM6P62312 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM6P62312 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms