Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.36□□□□□ -1.87
VBP1P61758 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.36□□□□□ -1.87
VBP1P61758 AC007563.3-201ENST00000433233 371 ntBASIC3.36□□□□□ -1.87
VBP1P61758 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
VBP1P61758 AL627308.1-201ENST00000435693 821 ntBASIC3.36□□□□□ -1.87
VBP1P61758 TRIM60P18-201ENST00000441518 828 ntBASIC3.36□□□□□ -1.87
VBP1P61758 RPL7P59-201ENST00000447700 943 ntBASIC3.36□□□□□ -1.87
VBP1P61758 RN7SL354P-201ENST00000469282 294 ntBASIC3.36□□□□□ -1.87
VBP1P61758 CYCSP20-201ENST00000473154 315 ntBASIC3.36□□□□□ -1.87
VBP1P61758 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
VBP1P61758 RN7SL741P-201ENST00000482473 289 ntBASIC3.36□□□□□ -1.87
VBP1P61758 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.36□□□□□ -1.87
VBP1P61758 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VBP1P61758 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.36□□□□□ -1.87
VBP1P61758 AC090568.1-201ENST00000509499 856 ntBASIC3.36□□□□□ -1.87
VBP1P61758 TMEM248P1-201ENST00000510579 951 ntBASIC3.36□□□□□ -1.87
VBP1P61758 RAC1P2-201ENST00000511164 579 ntBASIC3.36□□□□□ -1.87
VBP1P61758 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.36□□□□□ -1.87
VBP1P61758 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.36□□□□□ -1.87
VBP1P61758 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.36□□□□□ -1.87
VBP1P61758 AC037471.2-201ENST00000564941 598 ntBASIC3.36□□□□□ -1.87
VBP1P61758 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.36□□□□□ -1.87
VBP1P61758 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.36□□□□□ -1.87
VBP1P61758 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.36□□□□□ -1.87
VBP1P61758 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.36□□□□□ -1.87
VBP1P61758 SUMO2P15-201ENST00000604285 278 ntBASIC3.36□□□□□ -1.87
VBP1P61758 SNORA35B-201ENST00000607417 129 ntBASIC3.36□□□□□ -1.87
VBP1P61758 MIR6868-201ENST00000611215 58 ntBASIC3.36□□□□□ -1.87
VBP1P61758 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
VBP1P61758 AL139254.3-201ENST00000641097 674 ntBASIC3.36□□□□□ -1.87
VBP1P61758 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VBP1P61758 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.36□□□□□ -1.87
VBP1P61758 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
VBP1P61758 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.36□□□□□ -1.87
VBP1P61758 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VBP1P61758 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
VBP1P61758 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
VBP1P61758 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VBP1P61758 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VBP1P61758 C4BPAP1-201ENST00000415474 1893 ntBASIC3.35□□□□□ -1.87
VBP1P61758 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VBP1P61758 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VBP1P61758 RPL7P26-201ENST00000333817 754 ntBASIC3.35□□□□□ -1.87
VBP1P61758 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
VBP1P61758 RNA5SP507-201ENST00000363603 121 ntBASIC3.35□□□□□ -1.87
VBP1P61758 RNA5SP235-201ENST00000365411 114 ntBASIC3.35□□□□□ -1.87
VBP1P61758 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VBP1P61758 RPL17P36-201ENST00000420302 549 ntBASIC3.35□□□□□ -1.87
VBP1P61758 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.35□□□□□ -1.87
VBP1P61758 RPL24P2-201ENST00000421023 475 ntBASIC3.35□□□□□ -1.87
VBP1P61758 CHEK2P5-201ENST00000423877 246 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.35□□□□□ -1.87
VBP1P61758 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.35□□□□□ -1.87
VBP1P61758 AL353705.1-201ENST00000433468 480 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC074367.1-201ENST00000438685 1125 ntBASIC3.35□□□□□ -1.87
VBP1P61758 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.35□□□□□ -1.87
VBP1P61758 RPS15AP1-201ENST00000457423 391 ntBASIC3.35□□□□□ -1.87
VBP1P61758 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
VBP1P61758 RPL21P8-201ENST00000465083 535 ntBASIC3.35□□□□□ -1.87
VBP1P61758 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.35□□□□□ -1.87
VBP1P61758 RPL23AP73-201ENST00000492507 471 ntBASIC3.35□□□□□ -1.87
VBP1P61758 RN7SL604P-201ENST00000492589 296 ntBASIC3.35□□□□□ -1.87
VBP1P61758 RN7SL810P-201ENST00000493031 276 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.35□□□□□ -1.87
VBP1P61758 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC010476.1-201ENST00000519111 851 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.35□□□□□ -1.87
VBP1P61758 AC008083.2-201ENST00000546707 476 ntBASIC3.35□□□□□ -1.87
VBP1P61758 HMGN2P6-201ENST00000551091 273 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.35□□□□□ -1.87
VBP1P61758 MIR4489-201ENST00000578869 62 ntBASIC3.35□□□□□ -1.87
VBP1P61758 SS18L2P2-201ENST00000583960 235 ntBASIC3.35□□□□□ -1.87
VBP1P61758 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.35□□□□□ -1.87
VBP1P61758 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VBP1P61758 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.35□□□□□ -1.87
VBP1P61758 AC005084.1-201ENST00000605160 304 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC090948.1-201ENST00000607464 549 ntBASIC3.35□□□□□ -1.87
VBP1P61758 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.35□□□□□ -1.87
VBP1P61758 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.35□□□□□ -1.87
VBP1P61758 AC079684.1-201ENST00000621405 437 ntBASIC3.35□□□□□ -1.87
VBP1P61758 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
VBP1P61758 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VBP1P61758 AC090337.1-201ENST00000579651 2074 ntBASIC3.35□□□□□ -1.87
VBP1P61758 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
VBP1P61758 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VBP1P61758 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.35□□□□□ -1.87
VBP1P61758 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.35□□□□□ -1.87
VBP1P61758 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.35□□□□□ -1.87
VBP1P61758 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VBP1P61758 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
VBP1P61758 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.34□□□□□ -1.87
VBP1P61758 SAR1AP2-201ENST00000392696 594 ntBASIC3.34□□□□□ -1.87
VBP1P61758 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.34□□□□□ -1.87
VBP1P61758 SNORA11.3-201ENST00000408471 128 ntBASIC3.34□□□□□ -1.87
VBP1P61758 AC099535.1-201ENST00000408928 371 ntBASIC3.34□□□□□ -1.87
VBP1P61758 RNU4-25P-201ENST00000410569 230 ntBASIC3.34□□□□□ -1.87
VBP1P61758 RPS7P13-201ENST00000413955 498 ntBASIC3.34□□□□□ -1.87
VBP1P61758 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.34□□□□□ -1.87
VBP1P61758 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms