Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCN3P51790 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCN3P51790 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCN3P51790 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCN3P51790 HSFY6P-201ENST00000445573 403 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 YWHAQP9-201ENST00000445891 512 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 AL929288.2-201ENST00000446368 407 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCN3P51790 DNAJC19P8-201ENST00000452887 259 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 BX248409.1-201ENST00000455497 255 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 RPL37P3-201ENST00000456825 293 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCN3P51790 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCN3P51790 RPS29P19-201ENST00000479709 171 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 AC104164.2-201ENST00000496953 495 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCN3P51790 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.67□□□□□ -1.66
CLCN3P51790 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCN3P51790 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.67□□□□□ -1.66
CLCN3P51790 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCN3P51790 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLCN3P51790 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.67□□□□□ -1.66
CLCN3P51790 AL109618.2-201ENST00000605527 211 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 AC068057.2-201ENST00000624047 895 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCN3P51790 ATE1-AS1-202ENST00000636460 506 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 BX649567.1-201ENST00000642071 1134 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CLCN3P51790 AC092162.3-201ENST00000624511 1624 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCN3P51790 SEPT7P7-201ENST00000420492 1301 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 AC083843.3-201ENST00000623679 2186 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCN3P51790 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCN3P51790 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 RNA5SP283-201ENST00000365604 119 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 SNORA51.12-201ENST00000384448 134 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 RNU11-4P-201ENST00000391149 133 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 RNU6-77P-201ENST00000410554 91 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCN3P51790 RPS7P9-201ENST00000414704 586 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 MTND4P3-201ENST00000417829 541 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AL117339.2-201ENST00000430475 180 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CLCN3P51790 TPTE2P6-202ENST00000445572 1007 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCN3P51790 AC244505.3-201ENST00000454598 187 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 RNU7-140P-201ENST00000459546 60 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC093824.1-201ENST00000508796 343 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCN3P51790 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 SNORA19.3-201ENST00000516165 130 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC090151.1-201ENST00000520784 730 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCN3P51790 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCN3P51790 EEF1A1P37-201ENST00000522748 715 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.66□□□□□ -1.66
CLCN3P51790 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.66□□□□□ -1.66
CLCN3P51790 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCN3P51790 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCN3P51790 CYP2C60P-201ENST00000566088 139 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC022655.2-201ENST00000577280 318 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.66□□□□□ -1.66
CLCN3P51790 AL137072.1-201ENST00000603444 466 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC009948.4-201ENST00000604692 675 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AL355816.1-201ENST00000607951 118 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCN3P51790 AC140113.4-201ENST00000622087 222 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC109454.4-201ENST00000623411 649 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC006963.1-201ENST00000624003 1052 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC112484.5-201ENST00000624189 228 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 AC116563.2-201ENST00000624751 535 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CLCN3P51790 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CLCN3P51790 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.66□□□□□ -1.66
CLCN3P51790 SAMMSON-213ENST00000641336 1521 ntBASIC4.66□□□□□ -1.66
CLCN3P51790 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CLCN3P51790 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CLCN3P51790 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
CLCN3P51790 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.65□□□□□ -1.66
CLCN3P51790 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CLCN3P51790 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCN3P51790 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCN3P51790 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CLCN3P51790 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CLCN3P51790 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.65□□□□□ -1.66
CLCN3P51790 AC093719.1-202ENST00000392735 373 ntBASIC4.65□□□□□ -1.67
CLCN3P51790 ANAPC10P1-201ENST00000395991 556 ntBASIC4.65□□□□□ -1.67
CLCN3P51790 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCN3P51790 MTCO1P56-201ENST00000401674 224 ntBASIC4.65□□□□□ -1.67
CLCN3P51790 NCSTNP1-201ENST00000406229 144 ntBASIC4.65□□□□□ -1.67
CLCN3P51790 VDAC1P9-201ENST00000412766 841 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms