Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.26□□□□□ -1.41
USP11P51784 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.26□□□□□ -1.41
USP11P51784 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.26□□□□□ -1.41
USP11P51784 OR52B5P-201ENST00000435337 951 ntBASIC6.26□□□□□ -1.41
USP11P51784 RPL37P21-201ENST00000435890 276 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.26□□□□□ -1.41
USP11P51784 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 DNAJB5P1-201ENST00000454004 806 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC091564.1-201ENST00000464563 479 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC023598.1-201ENST00000472521 361 ntBASIC6.26□□□□□ -1.41
USP11P51784 FAM172BP-201ENST00000487497 1089 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.26□□□□□ -1.41
USP11P51784 AC022878.1-201ENST00000530684 149 ntBASIC6.26□□□□□ -1.41
USP11P51784 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.26□□□□□ -1.41
USP11P51784 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.26□□□□□ -1.41
USP11P51784 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.26□□□□□ -1.41
USP11P51784 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 AC112191.3-201ENST00000604371 277 ntBASIC6.26□□□□□ -1.41
USP11P51784 MIR6768-201ENST00000610734 72 ntBASIC6.26□□□□□ -1.41
USP11P51784 AL132765.2-201ENST00000610812 351 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC243756.2-201ENST00000618406 463 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP11P51784 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP11P51784 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP11P51784 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP11P51784 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.25□□□□□ -1.41
USP11P51784 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.25□□□□□ -1.41
USP11P51784 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP11P51784 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 Y_RNA.58-201ENST00000362807 102 ntBASIC6.25□□□□□ -1.41
USP11P51784 Y_RNA.138-201ENST00000363462 102 ntBASIC6.25□□□□□ -1.41
USP11P51784 Y_RNA.154-201ENST00000363624 102 ntBASIC6.25□□□□□ -1.41
USP11P51784 RN7SKP160-201ENST00000363804 340 ntBASIC6.25□□□□□ -1.41
USP11P51784 RNA5SP234-201ENST00000363916 119 ntBASIC6.25□□□□□ -1.41
USP11P51784 RNY3P1-201ENST00000365085 102 ntBASIC6.25□□□□□ -1.41
USP11P51784 RNY3-201ENST00000365484 102 ntBASIC6.25□□□□□ -1.41
USP11P51784 Y_RNA.490-201ENST00000384413 102 ntBASIC6.25□□□□□ -1.41
USP11P51784 U3.25-201ENST00000391209 220 ntBASIC6.25□□□□□ -1.41
USP11P51784 SNRPEP2-201ENST00000397592 279 ntBASIC6.25□□□□□ -1.41
USP11P51784 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 BX890604.2-201ENST00000427883 474 ntBASIC6.25□□□□□ -1.41
USP11P51784 TAAR7P-201ENST00000436141 242 ntBASIC6.25□□□□□ -1.41
USP11P51784 PSMC1P13-201ENST00000458195 985 ntBASIC6.25□□□□□ -1.41
USP11P51784 RN7SL51P-201ENST00000468230 285 ntBASIC6.25□□□□□ -1.41
USP11P51784 AC100832.1-201ENST00000471945 383 ntBASIC6.25□□□□□ -1.41
USP11P51784 AC007537.2-201ENST00000472093 511 ntBASIC6.25□□□□□ -1.41
USP11P51784 AC098583.1-201ENST00000480875 255 ntBASIC6.25□□□□□ -1.41
USP11P51784 RN7SL184P-201ENST00000488308 297 ntBASIC6.25□□□□□ -1.41
USP11P51784 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.25□□□□□ -1.41
USP11P51784 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 RNA5SP362-201ENST00000516048 118 ntBASIC6.25□□□□□ -1.41
USP11P51784 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.25□□□□□ -1.41
USP11P51784 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.25□□□□□ -1.41
USP11P51784 AL359212.1-201ENST00000556608 614 ntBASIC6.25□□□□□ -1.41
USP11P51784 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.25□□□□□ -1.41
USP11P51784 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.25□□□□□ -1.41
USP11P51784 AC115286.1-201ENST00000604298 434 ntBASIC6.25□□□□□ -1.41
USP11P51784 COX6CP4-201ENST00000605798 228 ntBASIC6.25□□□□□ -1.41
USP11P51784 RNU6-88P-201ENST00000606801 100 ntBASIC6.25□□□□□ -1.41
USP11P51784 AC093788.1-201ENST00000609356 927 ntBASIC6.25□□□□□ -1.41
USP11P51784 MIR8080-201ENST00000622224 89 ntBASIC6.25□□□□□ -1.41
USP11P51784 MKKS-204ENST00000639674 192 ntBASIC6.25□□□□□ -1.41
USP11P51784 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP11P51784 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.25□□□□□ -1.41
USP11P51784 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.25□□□□□ -1.41
USP11P51784 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USP11P51784 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USP11P51784 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
USP11P51784 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.24□□□□□ -1.41
USP11P51784 RNU6-1103P-201ENST00000384150 107 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms