Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMARCA4P51532 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
SMARCA4P51532 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMARCA4P51532 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SMARCA4P51532 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMARCA4P51532 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.07□□□□□ -1.44
SMARCA4P51532 YWHAQP9-201ENST00000445891 512 ntBASIC6.07□□□□□ -1.44
SMARCA4P51532 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.07□□□□□ -1.44
SMARCA4P51532 RPS3AP43-201ENST00000479743 781 ntBASIC6.07□□□□□ -1.44
SMARCA4P51532 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.07□□□□□ -1.44
SMARCA4P51532 AC020914.4-201ENST00000597690 277 ntBASIC6.07□□□□□ -1.44
SMARCA4P51532 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMARCA4P51532 AC092435.4-201ENST00000623012 4159 ntBASIC6.07□□□□□ -1.44
SMARCA4P51532 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMARCA4P51532 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMARCA4P51532 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC6.07□□□□□ -1.44
SMARCA4P51532 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.07□□□□□ -1.44
SMARCA4P51532 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.07□□□□□ -1.44
SMARCA4P51532 MIR513A2-201ENST00000385249 127 ntBASIC6.07□□□□□ -1.44
SMARCA4P51532 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.07□□□□□ -1.44
SMARCA4P51532 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMARCA4P51532 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA4P51532 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA4P51532 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA4P51532 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
SMARCA4P51532 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA4P51532 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA4P51532 AL078595.2-201ENST00000605309 1780 ntBASIC6.06□□□□□ -1.44
SMARCA4P51532 AL160175.1-201ENST00000428124 247 ntBASIC6.06□□□□□ -1.44
SMARCA4P51532 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.06□□□□□ -1.44
SMARCA4P51532 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC6.06□□□□□ -1.44
SMARCA4P51532 ANP32BP2-201ENST00000454525 545 ntBASIC6.06□□□□□ -1.44
SMARCA4P51532 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.06□□□□□ -1.44
SMARCA4P51532 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.06□□□□□ -1.44
SMARCA4P51532 IGHV3-63-201ENST00000518422 341 ntBASIC6.06□□□□□ -1.44
SMARCA4P51532 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.06□□□□□ -1.44
SMARCA4P51532 AC063952.1-203ENST00000634410 658 ntBASIC6.06□□□□□ -1.44
SMARCA4P51532 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SMARCA4P51532 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SMARCA4P51532 AC027290.2-201ENST00000623210 18662 ntBASIC6.06□□□□□ -1.44
SMARCA4P51532 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA4P51532 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA4P51532 RNU6-729P-201ENST00000384399 107 ntBASIC6.05□□□□□ -1.44
SMARCA4P51532 Z99755.1-201ENST00000414048 380 ntBASIC6.05□□□□□ -1.44
SMARCA4P51532 AL353678.1-201ENST00000422735 741 ntBASIC6.05□□□□□ -1.44
SMARCA4P51532 AL139132.1-201ENST00000431587 344 ntBASIC6.05□□□□□ -1.44
SMARCA4P51532 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.05□□□□□ -1.44
SMARCA4P51532 AC005798.1-201ENST00000513715 387 ntBASIC6.05□□□□□ -1.44
SMARCA4P51532 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.05□□□□□ -1.44
SMARCA4P51532 AP003392.5-201ENST00000607857 415 ntBASIC6.05□□□□□ -1.44
SMARCA4P51532 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA4P51532 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SMARCA4P51532 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
SMARCA4P51532 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.04□□□□□ -1.44
SMARCA4P51532 RHOT1P2-201ENST00000366423 333 ntBASIC6.04□□□□□ -1.44
SMARCA4P51532 KATNBL1P2-201ENST00000433311 835 ntBASIC6.04□□□□□ -1.44
SMARCA4P51532 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.04□□□□□ -1.44
SMARCA4P51532 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.04□□□□□ -1.44
SMARCA4P51532 SEPT14P1-201ENST00000458703 648 ntBASIC6.04□□□□□ -1.44
SMARCA4P51532 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC6.04□□□□□ -1.44
SMARCA4P51532 OR4R3P-201ENST00000525084 838 ntBASIC6.04□□□□□ -1.44
SMARCA4P51532 AP000926.4-201ENST00000527351 454 ntBASIC6.04□□□□□ -1.44
SMARCA4P51532 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.04□□□□□ -1.44
SMARCA4P51532 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC6.04□□□□□ -1.44
SMARCA4P51532 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC6.04□□□□□ -1.44
SMARCA4P51532 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
SMARCA4P51532 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SMARCA4P51532 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMARCA4P51532 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMARCA4P51532 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
SMARCA4P51532 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.03□□□□□ -1.44
SMARCA4P51532 AC008885.1-201ENST00000514930 301 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 AC093524.1-201ENST00000564266 1094 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.03□□□□□ -1.44
SMARCA4P51532 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SMARCA4P51532 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMARCA4P51532 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.03□□□□□ -1.44
SMARCA4P51532 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
SMARCA4P51532 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.03□□□□□ -1.44
SMARCA4P51532 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.03□□□□□ -1.44
SMARCA4P51532 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.03□□□□□ -1.44
SMARCA4P51532 APOOP4-201ENST00000513530 597 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 AC118465.1-201ENST00000513820 1271 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 HIGD1AP1-201ENST00000550979 275 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.03□□□□□ -1.44
SMARCA4P51532 AC006557.5-201ENST00000603126 811 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 AC013412.1-201ENST00000610687 192 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 BMS1P21-201ENST00000634565 365 ntBASIC6.03□□□□□ -1.44
SMARCA4P51532 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
SMARCA4P51532 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SMARCA4P51532 AC007390.2-201ENST00000606229 3803 ntBASIC6.02□□□□□ -1.45
SMARCA4P51532 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SMARCA4P51532 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMARCA4P51532 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMARCA4P51532 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC6.02□□□□□ -1.45
SMARCA4P51532 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC6.02□□□□□ -1.45
SMARCA4P51532 MIR422A-201ENST00000362286 90 ntBASIC6.02□□□□□ -1.45
SMARCA4P51532 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SMARCA4P51532 MTND4P22-201ENST00000413116 1169 ntBASIC6.02□□□□□ -1.45
SMARCA4P51532 AC026782.2-201ENST00000510845 636 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms