Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.77□□□□□ -1.49
MRE11P49959 UBE2NP1-201ENST00000545592 458 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AC126177.5-201ENST00000549599 178 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.77□□□□□ -1.49
MRE11P49959 AC006362.1-201ENST00000567392 174 ntBASIC5.77□□□□□ -1.49
MRE11P49959 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.77□□□□□ -1.49
MRE11P49959 AC006539.2-201ENST00000601729 572 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.77□□□□□ -1.49
MRE11P49959 AC015540.1-201ENST00000615828 501 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.77□□□□□ -1.49
MRE11P49959 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.77□□□□□ -1.49
MRE11P49959 MAPK10-286ENST00000641208 8747 ntBASIC5.77□□□□□ -1.49
MRE11P49959 ZNF833P-201ENST00000424938 1494 ntBASIC5.77□□□□□ -1.49
MRE11P49959 AC087359.1-201ENST00000508335 1740 ntBASIC5.77□□□□□ -1.49
MRE11P49959 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
MRE11P49959 AC017104.4-201ENST00000636283 1592 ntBASIC5.76□□□□□ -1.49
MRE11P49959 SPATA2P1-201ENST00000431223 2055 ntBASIC5.76□□□□□ -1.49
MRE11P49959 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
MRE11P49959 U3.2-201ENST00000362981 210 ntBASIC5.76□□□□□ -1.49
MRE11P49959 RNU1-20P-201ENST00000363314 162 ntBASIC5.76□□□□□ -1.49
MRE11P49959 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 HSPA8P15-201ENST00000401676 786 ntBASIC5.76□□□□□ -1.49
MRE11P49959 HMGB3P18-201ENST00000406327 590 ntBASIC5.76□□□□□ -1.49
MRE11P49959 U3.36-201ENST00000408418 213 ntBASIC5.76□□□□□ -1.49
MRE11P49959 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.76□□□□□ -1.49
MRE11P49959 AC009480.2-201ENST00000422916 432 ntBASIC5.76□□□□□ -1.49
MRE11P49959 OR5AW1P-201ENST00000426334 1006 ntBASIC5.76□□□□□ -1.49
MRE11P49959 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.76□□□□□ -1.49
MRE11P49959 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.76□□□□□ -1.49
MRE11P49959 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.76□□□□□ -1.49
MRE11P49959 GSTM5P1-201ENST00000434751 660 ntBASIC5.76□□□□□ -1.49
MRE11P49959 MTND1P4-201ENST00000435196 415 ntBASIC5.76□□□□□ -1.49
MRE11P49959 YWHAZP2-201ENST00000440317 728 ntBASIC5.76□□□□□ -1.49
MRE11P49959 MTCO1P19-201ENST00000443487 500 ntBASIC5.76□□□□□ -1.49
MRE11P49959 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.76□□□□□ -1.49
MRE11P49959 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 TPMTP4-201ENST00000450749 678 ntBASIC5.76□□□□□ -1.49
MRE11P49959 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 RPS6P4-201ENST00000494693 758 ntBASIC5.76□□□□□ -1.49
MRE11P49959 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.76□□□□□ -1.49
MRE11P49959 AC109635.6-201ENST00000525487 1113 ntBASIC5.76□□□□□ -1.49
MRE11P49959 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.76□□□□□ -1.49
MRE11P49959 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
MRE11P49959 ATP5F1P7-201ENST00000567330 760 ntBASIC5.76□□□□□ -1.49
MRE11P49959 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.76□□□□□ -1.49
MRE11P49959 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.76□□□□□ -1.49
MRE11P49959 MTCO1P40-201ENST00000574371 625 ntBASIC5.76□□□□□ -1.49
MRE11P49959 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 AC068944.2-201ENST00000610373 403 ntBASIC5.76□□□□□ -1.49
MRE11P49959 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 AC024023.1-201ENST00000624530 922 ntBASIC5.76□□□□□ -1.49
MRE11P49959 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
MRE11P49959 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
MRE11P49959 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MRE11P49959 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MRE11P49959 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
MRE11P49959 ASNSP1-204ENST00000641977 1664 ntBASIC5.75□□□□□ -1.49
MRE11P49959 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MRE11P49959 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MRE11P49959 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.75□□□□□ -1.49
MRE11P49959 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
MRE11P49959 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MRE11P49959 AC011493.1-201ENST00000596753 1632 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AL391994.1-201ENST00000254724 282 ntBASIC5.75□□□□□ -1.49
MRE11P49959 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
MRE11P49959 Y_RNA.3-201ENST00000362331 103 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RNU6-560P-201ENST00000364007 108 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RNA5SP87-201ENST00000384155 118 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RNU6-1200P-201ENST00000384162 107 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RNU6-1215P-201ENST00000384441 102 ntBASIC5.75□□□□□ -1.49
MRE11P49959 MT-TH-201ENST00000387441 69 ntBASIC5.75□□□□□ -1.49
MRE11P49959 SNORA26.8-201ENST00000391306 124 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AL034403.1-201ENST00000399414 885 ntBASIC5.75□□□□□ -1.49
MRE11P49959 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
MRE11P49959 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.75□□□□□ -1.49
MRE11P49959 AL139421.1-201ENST00000423010 169 ntBASIC5.75□□□□□ -1.49
MRE11P49959 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.75□□□□□ -1.49
MRE11P49959 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.75□□□□□ -1.49
MRE11P49959 GAPDHP25-201ENST00000447061 1001 ntBASIC5.75□□□□□ -1.49
MRE11P49959 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms