Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CYCSP12-201ENST00000437729 300 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.39□□□□□ -1.71
SOX2P48431 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 HMGN1P36-201ENST00000446623 298 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AL031584.1-201ENST00000447169 754 ntBASIC4.39□□□□□ -1.71
SOX2P48431 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 RPL26P28-201ENST00000451325 435 ntBASIC4.39□□□□□ -1.71
SOX2P48431 Z92846.1-201ENST00000456203 268 ntBASIC4.39□□□□□ -1.71
SOX2P48431 ARPC3P2-201ENST00000457786 533 ntBASIC4.39□□□□□ -1.71
SOX2P48431 RN7SL547P-201ENST00000490793 290 ntBASIC4.39□□□□□ -1.71
SOX2P48431 RN7SL441P-201ENST00000492388 296 ntBASIC4.39□□□□□ -1.71
SOX2P48431 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 AC004069.2-201ENST00000505438 1114 ntBASIC4.39□□□□□ -1.71
SOX2P48431 RPS4XP20-201ENST00000505751 772 ntBASIC4.39□□□□□ -1.71
SOX2P48431 KRT19P6-201ENST00000510983 209 ntBASIC4.39□□□□□ -1.71
SOX2P48431 MTCYBP43-201ENST00000513621 740 ntBASIC4.39□□□□□ -1.71
SOX2P48431 ENPP7P9-201ENST00000514456 627 ntBASIC4.39□□□□□ -1.71
SOX2P48431 RNU6-583P-201ENST00000516012 92 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 SOD1P3-201ENST00000518682 454 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.39□□□□□ -1.71
SOX2P48431 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.39□□□□□ -1.71
SOX2P48431 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.39□□□□□ -1.71
SOX2P48431 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 AL596327.1-201ENST00000603629 213 ntBASIC4.39□□□□□ -1.71
SOX2P48431 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.39□□□□□ -1.71
SOX2P48431 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.39□□□□□ -1.71
SOX2P48431 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 AC022106.2-201ENST00000620114 757 ntBASIC4.39□□□□□ -1.71
SOX2P48431 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 AL356121.2-201ENST00000624715 780 ntBASIC4.39□□□□□ -1.71
SOX2P48431 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX2P48431 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.39□□□□□ -1.71
SOX2P48431 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX2P48431 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX2P48431 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.39□□□□□ -1.71
SOX2P48431 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.39□□□□□ -1.71
SOX2P48431 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 AL450326.2-201ENST00000421913 1962 ntBASIC4.38□□□□□ -1.71
SOX2P48431 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX2P48431 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SOX2P48431 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SOX2P48431 SNORA70.10-201ENST00000384515 134 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AL512430.2-201ENST00000406786 339 ntBASIC4.38□□□□□ -1.71
SOX2P48431 RNU2-28P-201ENST00000410457 189 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AL663109.1-201ENST00000411498 844 ntBASIC4.38□□□□□ -1.71
SOX2P48431 TMBIM7P-201ENST00000418074 855 ntBASIC4.38□□□□□ -1.71
SOX2P48431 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.38□□□□□ -1.71
SOX2P48431 SLC35E1P1-201ENST00000419313 864 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 RPS3AP44-201ENST00000425466 790 ntBASIC4.38□□□□□ -1.71
SOX2P48431 MTCO3P30-201ENST00000426425 670 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AC073335.1-201ENST00000427776 363 ntBASIC4.38□□□□□ -1.71
SOX2P48431 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX2P48431 TRIM60P18-201ENST00000441518 828 ntBASIC4.38□□□□□ -1.71
SOX2P48431 RPL10P17-201ENST00000453852 316 ntBASIC4.38□□□□□ -1.71
SOX2P48431 SNRPGP9-201ENST00000456025 225 ntBASIC4.38□□□□□ -1.71
SOX2P48431 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 AC094085.1-201ENST00000468914 584 ntBASIC4.38□□□□□ -1.71
SOX2P48431 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX2P48431 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX2P48431 AC090013.1-201ENST00000485147 480 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX2P48431 RPS4XP15-201ENST00000489210 795 ntBASIC4.38□□□□□ -1.71
SOX2P48431 OR4G11P-201ENST00000492842 939 ntBASIC4.38□□□□□ -1.71
SOX2P48431 PFN1P8-201ENST00000497012 543 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX2P48431 AC022447.1-201ENST00000515358 464 ntBASIC4.38□□□□□ -1.71
SOX2P48431 RNA5SP228-201ENST00000516232 133 ntBASIC4.38□□□□□ -1.71
SOX2P48431 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.38□□□□□ -1.71
SOX2P48431 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX2P48431 AC126177.5-201ENST00000549599 178 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX2P48431 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX2P48431 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX2P48431 AC074051.3-201ENST00000570238 358 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX2P48431 AC078795.2-201ENST00000602835 1252 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AC123786.2-201ENST00000603459 275 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AC010200.2-201ENST00000605098 235 ntBASIC4.38□□□□□ -1.71
SOX2P48431 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX2P48431 AL008729.2-201ENST00000606393 473 ntBASIC4.38□□□□□ -1.71
SOX2P48431 RNU6-88P-201ENST00000606801 100 ntBASIC4.38□□□□□ -1.71
SOX2P48431 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms