Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC090971.4-201ENST00000560291 1800 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL12P48061 LINC01355-201ENST00000566551 5444 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CXCL12P48061 GNG5P1-201ENST00000255500 204 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 RNU6-891P-201ENST00000384280 111 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL12P48061 AL591503.2-201ENST00000442314 1005 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 RPS17P13-201ENST00000448974 407 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 AC006480.1-201ENST00000449887 378 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC133473.1-201ENST00000455173 299 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 AP001486.1-201ENST00000463339 476 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 AL049873.1-201ENST00000480540 376 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL12P48061 RAC1P2-201ENST00000511164 579 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 RNU2-27P-201ENST00000516185 142 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL12P48061 AL049874.4-201ENST00000557593 255 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 SULT1C2P2-201ENST00000562517 294 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.7□□□□□ -1.82
CXCL12P48061 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.7□□□□□ -1.82
CXCL12P48061 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.7□□□□□ -1.82
CXCL12P48061 MIR8057-201ENST00000620957 69 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CXCL12P48061 AC007342.9-201ENST00000623877 1385 ntBASIC3.7□□□□□ -1.82
CXCL12P48061 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CXCL12P48061 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CXCL12P48061 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CXCL12P48061 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL12P48061 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CXCL12P48061 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL12P48061 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL12P48061 OR13C3-201ENST00000374781 1108 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 AC240504.1-201ENST00000395709 845 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.69□□□□□ -1.82
CXCL12P48061 OR1AA1P-201ENST00000419597 916 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL12P48061 UBE2V2P3-201ENST00000433562 437 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL12P48061 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.69□□□□□ -1.82
CXCL12P48061 HMGN1P8-201ENST00000463578 288 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 RPL7P24-201ENST00000493052 752 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL12P48061 AC008802.1-201ENST00000519121 791 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 OR7E13P-201ENST00000526052 910 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL12P48061 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL12P48061 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL12P48061 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL12P48061 CYP4A43P-201ENST00000568156 121 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL12P48061 AC006077.1-201ENST00000604746 343 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 AC023813.4-201ENST00000607580 580 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 AC069209.1-201ENST00000619282 651 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 AL158062.1-201ENST00000619632 745 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 CR392039.4-201ENST00000624968 501 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL12P48061 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CXCL12P48061 AL079305.1-201ENST00000623159 3008 ntBASIC3.69□□□□□ -1.82
CXCL12P48061 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL12P48061 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL12P48061 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL12P48061 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL12P48061 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CXCL12P48061 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL12P48061 MTND4P26-201ENST00000415971 1359 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL12P48061 RNU6-386P-201ENST00000362650 107 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 RNU6-1263P-201ENST00000384601 106 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 HDGFP1-201ENST00000405943 252 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL12P48061 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL12P48061 KCTD9P3-201ENST00000434597 1169 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 RPL26P28-201ENST00000451325 435 ntBASIC3.68□□□□□ -1.82
CXCL12P48061 FGF7P3-201ENST00000454645 303 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms