Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.84□□□□□ -1.79
NKX2-1P43699 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
NKX2-1P43699 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NKX2-1P43699 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
NKX2-1P43699 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NKX2-1P43699 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
NKX2-1P43699 AC090229.1-201ENST00000590983 1609 ntBASIC3.84□□□□□ -1.8
NKX2-1P43699 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
NKX2-1P43699 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.84□□□□□ -1.8
NKX2-1P43699 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX2-1P43699 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 OR10J6P-201ENST00000289731 930 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NKX2-1P43699 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 RNU6-492P-201ENST00000363035 104 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 RN7SKP115-201ENST00000363177 317 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 RNU6-1243P-201ENST00000364028 107 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 RNU1-43P-201ENST00000365052 165 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 RNU6-441P-201ENST00000384545 106 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 AL589647.1-201ENST00000402485 466 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-1P43699 FCF1P2-201ENST00000415284 583 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AF186996.5-201ENST00000418098 904 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 USP9YP31-201ENST00000431405 881 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX2-1P43699 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 PTENP1-201ENST00000447117 1215 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 HMGN2P25-201ENST00000486956 268 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC005726.1-201ENST00000494679 427 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC093755.1-201ENST00000512950 1023 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 NDUFB4P12-201ENST00000513465 390 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
NKX2-1P43699 RNA5SP360-201ENST00000516555 118 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC027309.2-201ENST00000520566 192 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC090151.1-201ENST00000520784 730 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 C1GALT1P3-201ENST00000522049 819 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC090819.1-201ENST00000523800 1111 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NKX2-1P43699 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC091178.1-203ENST00000584586 279 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.83□□□□□ -1.8
NKX2-1P43699 VN1R78P-201ENST00000597393 564 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.83□□□□□ -1.8
NKX2-1P43699 AC010680.4-201ENST00000605334 543 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC105429.2-201ENST00000610567 517 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AC107075.1-201ENST00000613695 314 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 AP006248.2-201ENST00000623309 592 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 MIR4496-201ENST00000635896 61 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 ELL2P4-201ENST00000446870 1376 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.83□□□□□ -1.8
NKX2-1P43699 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
NKX2-1P43699 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.83□□□□□ -1.8
NKX2-1P43699 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NKX2-1P43699 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 AC068254.2-201ENST00000623938 3577 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NKX2-1P43699 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NKX2-1P43699 DCAF13P3-201ENST00000561147 1334 ntBASIC3.82□□□□□ -1.8
NKX2-1P43699 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.82□□□□□ -1.8
NKX2-1P43699 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms