Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.71□□□□□ -1.34
RXRBP28702 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
RXRBP28702 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.71□□□□□ -1.34
RXRBP28702 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RXRBP28702 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.71□□□□□ -1.34
RXRBP28702 ICE2P1-201ENST00000512800 1849 ntBASIC6.71□□□□□ -1.34
RXRBP28702 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RXRBP28702 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.7□□□□□ -1.34
RXRBP28702 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.7□□□□□ -1.34
RXRBP28702 OR4F13P-202ENST00000560066 2054 ntBASIC6.7□□□□□ -1.34
RXRBP28702 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.7□□□□□ -1.34
RXRBP28702 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.7□□□□□ -1.34
RXRBP28702 Z95114.1-201ENST00000624264 14574 ntBASIC6.7□□□□□ -1.34
RXRBP28702 AC007342.7-201ENST00000624610 2337 ntBASIC6.7□□□□□ -1.34
RXRBP28702 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 Y_RNA.450-201ENST00000384198 113 ntBASIC6.7□□□□□ -1.34
RXRBP28702 RNA5SP372-201ENST00000390836 115 ntBASIC6.7□□□□□ -1.34
RXRBP28702 RNU6-316P-201ENST00000391027 107 ntBASIC6.7□□□□□ -1.34
RXRBP28702 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 RPS26P38-201ENST00000414476 348 ntBASIC6.7□□□□□ -1.34
RXRBP28702 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.7□□□□□ -1.34
RXRBP28702 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.7□□□□□ -1.34
RXRBP28702 MTND1P18-201ENST00000448191 573 ntBASIC6.7□□□□□ -1.34
RXRBP28702 IGHV5-78-201ENST00000450948 295 ntBASIC6.7□□□□□ -1.34
RXRBP28702 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 AC010733.1-201ENST00000451515 401 ntBASIC6.7□□□□□ -1.34
RXRBP28702 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.7□□□□□ -1.34
RXRBP28702 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.7□□□□□ -1.34
RXRBP28702 AC025459.1-201ENST00000504072 156 ntBASIC6.7□□□□□ -1.34
RXRBP28702 MTCO3P9-201ENST00000506989 781 ntBASIC6.7□□□□□ -1.34
RXRBP28702 AC022483.1-201ENST00000514020 567 ntBASIC6.7□□□□□ -1.34
RXRBP28702 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.7□□□□□ -1.34
RXRBP28702 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 OR4K7P-201ENST00000580232 945 ntBASIC6.7□□□□□ -1.34
RXRBP28702 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.7□□□□□ -1.34
RXRBP28702 MIR3944-201ENST00000581277 108 ntBASIC6.7□□□□□ -1.34
RXRBP28702 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.7□□□□□ -1.34
RXRBP28702 AC012065.4-201ENST00000602445 679 ntBASIC6.7□□□□□ -1.34
RXRBP28702 AC009027.1-201ENST00000604510 479 ntBASIC6.7□□□□□ -1.34
RXRBP28702 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
RXRBP28702 NCOA4P2-201ENST00000340589 1813 ntBASIC6.7□□□□□ -1.34
RXRBP28702 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.7□□□□□ -1.34
RXRBP28702 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
RXRBP28702 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RXRBP28702 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.7□□□□□ -1.34
RXRBP28702 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.7□□□□□ -1.34
RXRBP28702 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.7□□□□□ -1.34
RXRBP28702 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.69□□□□□ -1.34
RXRBP28702 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.69□□□□□ -1.34
RXRBP28702 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 OR56B2P-202ENST00000641377 2453 ntBASIC6.69□□□□□ -1.34
RXRBP28702 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RXRBP28702 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 RNA5SP27-201ENST00000363839 119 ntBASIC6.69□□□□□ -1.34
RXRBP28702 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 RNU1-136P-201ENST00000384181 164 ntBASIC6.69□□□□□ -1.34
RXRBP28702 RNU6-1009P-201ENST00000390996 107 ntBASIC6.69□□□□□ -1.34
RXRBP28702 RPL26P37-201ENST00000411983 438 ntBASIC6.69□□□□□ -1.34
RXRBP28702 RSU1P3-201ENST00000412878 835 ntBASIC6.69□□□□□ -1.34
RXRBP28702 RPS15AP38-201ENST00000413110 372 ntBASIC6.69□□□□□ -1.34
RXRBP28702 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.69□□□□□ -1.34
RXRBP28702 GDI2P2-201ENST00000445131 608 ntBASIC6.69□□□□□ -1.34
RXRBP28702 PHBP16-201ENST00000446318 950 ntBASIC6.69□□□□□ -1.34
RXRBP28702 NUTF2P3-201ENST00000448540 384 ntBASIC6.69□□□□□ -1.34
RXRBP28702 AC079776.3-201ENST00000450665 370 ntBASIC6.69□□□□□ -1.34
RXRBP28702 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.69□□□□□ -1.34
RXRBP28702 RN7SL542P-201ENST00000467147 294 ntBASIC6.69□□□□□ -1.34
RXRBP28702 AC006499.6-201ENST00000511169 607 ntBASIC6.69□□□□□ -1.34
RXRBP28702 RN7SKP141-201ENST00000516167 338 ntBASIC6.69□□□□□ -1.34
RXRBP28702 SNORA31.9-201ENST00000516429 84 ntBASIC6.69□□□□□ -1.34
RXRBP28702 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.69□□□□□ -1.34
RXRBP28702 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.69□□□□□ -1.34
RXRBP28702 OR7K1P-201ENST00000546439 926 ntBASIC6.69□□□□□ -1.34
RXRBP28702 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 GTF2IP22-201ENST00000554443 182 ntBASIC6.69□□□□□ -1.34
RXRBP28702 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.69□□□□□ -1.34
RXRBP28702 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.69□□□□□ -1.34
RXRBP28702 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.69□□□□□ -1.34
RXRBP28702 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.69□□□□□ -1.34
RXRBP28702 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RXRBP28702 AC023158.2-201ENST00000614876 543 ntBASIC6.69□□□□□ -1.34
RXRBP28702 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.69□□□□□ -1.34
RXRBP28702 AC002553.4-201ENST00000616896 331 ntBASIC6.69□□□□□ -1.34
RXRBP28702 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.69□□□□□ -1.34
RXRBP28702 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms