Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC006115.2-201ENST00000596823 202 ntBASIC4.96□□□□□ -1.62
CD40P25942 AC008782.1-201ENST00000603386 430 ntBASIC4.96□□□□□ -1.62
CD40P25942 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.96□□□□□ -1.62
CD40P25942 RNU6-87P-201ENST00000607561 108 ntBASIC4.96□□□□□ -1.62
CD40P25942 CU639417.4-201ENST00000623928 207 ntBASIC4.96□□□□□ -1.62
CD40P25942 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.96□□□□□ -1.62
CD40P25942 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD40P25942 AL161756.3-201ENST00000641216 2071 ntBASIC4.96□□□□□ -1.62
CD40P25942 AC092125.1-201ENST00000562568 1995 ntBASIC4.96□□□□□ -1.62
CD40P25942 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.96□□□□□ -1.62
CD40P25942 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD40P25942 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CD40P25942 AC004656.1-201ENST00000568479 4951 ntBASIC4.96□□□□□ -1.62
CD40P25942 ERCC6-202ENST00000374127 1782 ntBASIC4.96□□□□□ -1.62
CD40P25942 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD40P25942 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD40P25942 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 RNU6-878P-201ENST00000384578 110 ntBASIC4.95□□□□□ -1.62
CD40P25942 RPL23AP17-201ENST00000401064 499 ntBASIC4.95□□□□□ -1.62
CD40P25942 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 OR6E1P-201ENST00000414424 923 ntBASIC4.95□□□□□ -1.62
CD40P25942 AC245052.5-201ENST00000416320 649 ntBASIC4.95□□□□□ -1.62
CD40P25942 AC069157.1-201ENST00000421749 137 ntBASIC4.95□□□□□ -1.62
CD40P25942 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 RPL12P46-201ENST00000436610 195 ntBASIC4.95□□□□□ -1.62
CD40P25942 AL450996.1-201ENST00000445574 1202 ntBASIC4.95□□□□□ -1.62
CD40P25942 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.95□□□□□ -1.62
CD40P25942 RN7SL72P-201ENST00000460697 269 ntBASIC4.95□□□□□ -1.62
CD40P25942 RPS23P2-201ENST00000463671 415 ntBASIC4.95□□□□□ -1.62
CD40P25942 RBM43P1-201ENST00000476891 1081 ntBASIC4.95□□□□□ -1.62
CD40P25942 RPS3AP14-201ENST00000483907 780 ntBASIC4.95□□□□□ -1.62
CD40P25942 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.95□□□□□ -1.62
CD40P25942 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.95□□□□□ -1.62
CD40P25942 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.95□□□□□ -1.62
CD40P25942 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 AC010342.1-201ENST00000514047 877 ntBASIC4.95□□□□□ -1.62
CD40P25942 RNA5SP362-201ENST00000516048 118 ntBASIC4.95□□□□□ -1.62
CD40P25942 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.95□□□□□ -1.62
CD40P25942 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.95□□□□□ -1.62
CD40P25942 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.95□□□□□ -1.62
CD40P25942 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.95□□□□□ -1.62
CD40P25942 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.95□□□□□ -1.62
CD40P25942 OR10AB1P-201ENST00000609613 938 ntBASIC4.95□□□□□ -1.62
CD40P25942 AL359880.1-201ENST00000621879 266 ntBASIC4.95□□□□□ -1.62
CD40P25942 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 AC010149.2-201ENST00000637608 315 ntBASIC4.95□□□□□ -1.62
CD40P25942 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CD40P25942 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 AC092447.10-201ENST00000620607 1652 ntBASIC4.95□□□□□ -1.62
CD40P25942 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CD40P25942 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CD40P25942 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.95□□□□□ -1.62
CD40P25942 SAMMSON-210ENST00000641260 1308 ntBASIC4.95□□□□□ -1.62
CD40P25942 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CD40P25942 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CD40P25942 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 Y_RNA.9-201ENST00000362354 101 ntBASIC4.94□□□□□ -1.62
CD40P25942 RN7SKP186-201ENST00000365371 303 ntBASIC4.94□□□□□ -1.62
CD40P25942 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CD40P25942 Y_RNA.450-201ENST00000384198 113 ntBASIC4.94□□□□□ -1.62
CD40P25942 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CD40P25942 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CD40P25942 CALM2P3-201ENST00000400429 449 ntBASIC4.94□□□□□ -1.62
CD40P25942 BTBD10P2-201ENST00000404779 676 ntBASIC4.94□□□□□ -1.62
CD40P25942 CIR1P3-201ENST00000405137 479 ntBASIC4.94□□□□□ -1.62
CD40P25942 CCNG1P1-201ENST00000406783 885 ntBASIC4.94□□□□□ -1.62
CD40P25942 OR3A2-201ENST00000408891 1076 ntBASIC4.94□□□□□ -1.62
CD40P25942 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.94□□□□□ -1.62
CD40P25942 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.94□□□□□ -1.62
CD40P25942 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms