Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 BMS1P19-201ENST00000433925 393 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 RPS26P40-201ENST00000435209 294 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL035690.1-201ENST00000490892 383 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 UBA52P3-201ENST00000491303 382 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AC009646.1-201ENST00000510455 318 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AP001922.4-201ENST00000526967 290 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AC005084.1-201ENST00000605160 304 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 CYP4F35P-202ENST00000636121 390 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 AL645937.1-201ENST00000641739 1652 ntBASIC7.38□□□□□ -1.23
CSB-PGBD3P0DP91 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 MTCO1P14-201ENST00000441695 1559 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AP003170.5-201ENST00000397185 335 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AL009179.1-201ENST00000406085 265 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 RPL17P12-201ENST00000413391 526 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AIMP1P1-201ENST00000418670 937 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AC073335.1-201ENST00000427776 363 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 RNU6-583P-201ENST00000516012 92 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AP002748.2-201ENST00000528671 348 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 HPRT1P3-201ENST00000539521 576 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AL121594.2-201ENST00000541658 472 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AC136618.2-201ENST00000575091 400 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AL592295.2-201ENST00000612578 206 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AC010205.1-201ENST00000616668 449 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 AC074101.1-201ENST00000637861 241 ntBASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CSB-PGBD3P0DP91 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 HSPA8P17-201ENST00000427029 1382 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 Y_RNA.279-201ENST00000364763 95 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 Y_RNA.573-201ENST00000384763 105 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 MIR506-201ENST00000384998 124 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 SNORA40.3-201ENST00000390964 122 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 TMBIM7P-201ENST00000418074 855 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AL389915.1-201ENST00000422463 466 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AL953862.1-201ENST00000423016 168 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 RPL7P56-201ENST00000429441 717 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 PPIAP13-201ENST00000434706 478 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 RPS29P25-201ENST00000481709 171 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC108078.1-201ENST00000508073 725 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 SCARNA16.4-201ENST00000516956 187 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 DEFB131D-201ENST00000526803 184 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC090515.3-201ENST00000560431 315 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 RPL10P14-201ENST00000565265 298 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 MIR4675-201ENST00000577898 77 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms