Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC010265.1-201ENST00000513509 211 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 AC138701.1-201ENST00000524329 714 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL1P09341 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC2.82□□□□□ -1.96
CXCL1P09341 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL1P09341 MIR4480-201ENST00000582492 71 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 MIR4715-201ENST00000584117 79 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 AC011477.5-201ENST00000586571 259 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL1P09341 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 MIR3653-201ENST00000625572 110 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 AL079305.1-201ENST00000623159 3008 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 DCAF13P1-201ENST00000495256 1330 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.81□□□□□ -1.96
CXCL1P09341 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.81□□□□□ -1.96
CXCL1P09341 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 RNA5SP447-201ENST00000363749 119 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 DYNLT3P1-201ENST00000378574 347 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 PRELID3BP11-201ENST00000414230 479 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 HMGB3P20-201ENST00000417997 600 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.81□□□□□ -1.96
CXCL1P09341 DNAJC19P7-201ENST00000428811 344 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC023141.6-201ENST00000429418 337 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC2.81□□□□□ -1.96
CXCL1P09341 RPS11P1-201ENST00000451072 473 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC099563.1-201ENST00000456086 418 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 RPS23P7-201ENST00000466210 444 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 UQCRHP4-201ENST00000471686 272 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC084357.1-201ENST00000473404 255 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 KCTD9P5-201ENST00000504141 1170 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.81□□□□□ -1.96
CXCL1P09341 MTCO1P30-201ENST00000515244 580 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL1P09341 OR5D17P-201ENST00000531492 978 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 NPM1P47-201ENST00000560843 856 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC243654.2-201ENST00000612843 443 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 MIR8058-201ENST00000615737 89 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC139769.3-201ENST00000618383 175 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 CCT5-215ENST00000625723 135 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC138649.5-201ENST00000637456 137 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC096656.1-201ENST00000623826 1364 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL1P09341 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CXCL1P09341 AC068647.1-201ENST00000489539 2265 ntBASIC2.81□□□□□ -1.96
CXCL1P09341 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.81□□□□□ -1.96
CXCL1P09341 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
CXCL1P09341 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXCL1P09341 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CXCL1P09341 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 AC091152.2-201ENST00000591628 2569 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.8□□□□□ -1.96
CXCL1P09341 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 AC007823.1-201ENST00000569932 1566 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC138915.3-201ENST00000562908 1389 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 RNA5SP509-201ENST00000364577 119 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CXCL1P09341 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.8□□□□□ -1.96
CXCL1P09341 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL1P09341 AC069213.2-201ENST00000420238 366 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL1P09341 COX6CP15-201ENST00000426313 211 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL1P09341 OR2B8P-201ENST00000432841 938 ntBASIC2.8□□□□□ -1.96
CXCL1P09341 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms