Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FAM133DP-201ENST00000464802 691 ntBASIC3.93□□□□□ -1.78
APOEP02649 AC010307.1-201ENST00000467206 836 ntBASIC3.93□□□□□ -1.78
APOEP02649 AC084198.1-201ENST00000477747 402 ntBASIC3.93□□□□□ -1.78
APOEP02649 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.93□□□□□ -1.78
APOEP02649 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.93□□□□□ -1.78
APOEP02649 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.93□□□□□ -1.78
APOEP02649 SNORD116-26-201ENST00000516006 96 ntBASIC3.93□□□□□ -1.78
APOEP02649 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.93□□□□□ -1.78
APOEP02649 MTCO1P49-201ENST00000523429 802 ntBASIC3.93□□□□□ -1.78
APOEP02649 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.93□□□□□ -1.78
APOEP02649 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
APOEP02649 AC068714.1-201ENST00000559623 800 ntBASIC3.93□□□□□ -1.78
APOEP02649 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.93□□□□□ -1.78
APOEP02649 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.93□□□□□ -1.78
APOEP02649 AL133247.2-201ENST00000603236 482 ntBASIC3.93□□□□□ -1.78
APOEP02649 AL137849.1-201ENST00000604767 169 ntBASIC3.93□□□□□ -1.78
APOEP02649 BRDTP1-201ENST00000605735 677 ntBASIC3.93□□□□□ -1.78
APOEP02649 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.93□□□□□ -1.78
APOEP02649 AC012531.5-201ENST00000611375 151 ntBASIC3.93□□□□□ -1.78
APOEP02649 AL161637.1-201ENST00000622380 412 ntBASIC3.93□□□□□ -1.78
APOEP02649 AL356863.1-201ENST00000623378 1080 ntBASIC3.93□□□□□ -1.78
APOEP02649 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
APOEP02649 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.92□□□□□ -1.78
APOEP02649 AC024560.2-201ENST00000507981 1497 ntBASIC3.92□□□□□ -1.78
APOEP02649 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
APOEP02649 OR10AB1P-202ENST00000641219 1686 ntBASIC3.92□□□□□ -1.78
APOEP02649 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 AC093084.1-201ENST00000424233 687 ntBASIC3.92□□□□□ -1.78
APOEP02649 AL035246.1-201ENST00000433554 1255 ntBASIC3.92□□□□□ -1.78
APOEP02649 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.92□□□□□ -1.78
APOEP02649 DNAJC19P1-201ENST00000455312 319 ntBASIC3.92□□□□□ -1.78
APOEP02649 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.92□□□□□ -1.78
APOEP02649 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.92□□□□□ -1.78
APOEP02649 RAC1P2-201ENST00000511164 579 ntBASIC3.92□□□□□ -1.78
APOEP02649 AC023632.4-201ENST00000517783 191 ntBASIC3.92□□□□□ -1.78
APOEP02649 IGKV2-23-201ENST00000518729 323 ntBASIC3.92□□□□□ -1.78
APOEP02649 MED28P5-201ENST00000528254 438 ntBASIC3.92□□□□□ -1.78
APOEP02649 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 AC092747.2-201ENST00000545069 983 ntBASIC3.92□□□□□ -1.78
APOEP02649 MIR5047-201ENST00000579212 100 ntBASIC3.92□□□□□ -1.78
APOEP02649 AC006130.2-201ENST00000586202 326 ntBASIC3.92□□□□□ -1.78
APOEP02649 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.92□□□□□ -1.78
APOEP02649 AL049634.3-201ENST00000604968 457 ntBASIC3.92□□□□□ -1.78
APOEP02649 C2orf27A-204ENST00000623058 969 ntBASIC3.92□□□□□ -1.78
APOEP02649 AC034229.5-201ENST00000624258 185 ntBASIC3.92□□□□□ -1.78
APOEP02649 AC091905.1-201ENST00000624400 311 ntBASIC3.92□□□□□ -1.78
APOEP02649 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.92□□□□□ -1.78
APOEP02649 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
APOEP02649 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
APOEP02649 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.92□□□□□ -1.78
APOEP02649 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.92□□□□□ -1.78
APOEP02649 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
APOEP02649 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.91□□□□□ -1.78
APOEP02649 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
APOEP02649 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
APOEP02649 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
APOEP02649 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.91□□□□□ -1.78
APOEP02649 RNU6-167P-201ENST00000384292 106 ntBASIC3.91□□□□□ -1.78
APOEP02649 MIR134-201ENST00000385258 73 ntBASIC3.91□□□□□ -1.78
APOEP02649 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
APOEP02649 HSPE1P8-201ENST00000406997 288 ntBASIC3.91□□□□□ -1.78
APOEP02649 RPL21P109-201ENST00000422213 475 ntBASIC3.91□□□□□ -1.78
APOEP02649 AL138785.1-201ENST00000425821 331 ntBASIC3.91□□□□□ -1.78
APOEP02649 TRGV7-201ENST00000427089 353 ntBASIC3.91□□□□□ -1.78
APOEP02649 AL445584.1-201ENST00000431451 330 ntBASIC3.91□□□□□ -1.78
APOEP02649 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.91□□□□□ -1.78
APOEP02649 MTCYBP21-201ENST00000443300 1113 ntBASIC3.91□□□□□ -1.78
APOEP02649 NOTCH2P1-201ENST00000443481 624 ntBASIC3.91□□□□□ -1.78
APOEP02649 CDC27P1-201ENST00000445384 715 ntBASIC3.91□□□□□ -1.78
APOEP02649 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.91□□□□□ -1.78
APOEP02649 AL133162.1-201ENST00000463228 453 ntBASIC3.91□□□□□ -1.78
APOEP02649 TRBV12-2-201ENST00000489763 344 ntBASIC3.91□□□□□ -1.78
APOEP02649 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.91□□□□□ -1.78
APOEP02649 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.91□□□□□ -1.78
APOEP02649 HMGN1P11-201ENST00000508668 303 ntBASIC3.91□□□□□ -1.78
APOEP02649 RNA5SP208-201ENST00000516156 78 ntBASIC3.91□□□□□ -1.78
APOEP02649 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.91□□□□□ -1.78
APOEP02649 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.91□□□□□ -1.78
APOEP02649 BMS1P7-201ENST00000602440 1052 ntBASIC3.91□□□□□ -1.78
APOEP02649 AC112230.1-201ENST00000604342 547 ntBASIC3.91□□□□□ -1.78
APOEP02649 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
APOEP02649 AL391497.1-201ENST00000608671 547 ntBASIC3.91□□□□□ -1.78
APOEP02649 AC244205.2-202ENST00000635781 342 ntBASIC3.91□□□□□ -1.78
APOEP02649 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
APOEP02649 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
APOEP02649 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
APOEP02649 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
APOEP02649 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
APOEP02649 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
APOEP02649 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
APOEP02649 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
APOEP02649 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.78
APOEP02649 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.78
APOEP02649 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms