Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OR10V3P-201ENST00000525712 725 ntBASIC4.39□□□□□ -1.71
LDLRP01130 OR8I1P-201ENST00000529291 931 ntBASIC4.39□□□□□ -1.71
LDLRP01130 LRRC6P1-201ENST00000532188 885 ntBASIC4.39□□□□□ -1.71
LDLRP01130 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.39□□□□□ -1.71
LDLRP01130 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AC091178.1-203ENST00000584586 279 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 AC008751.2-201ENST00000597885 980 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC005191.1-201ENST00000603950 358 ntBASIC4.39□□□□□ -1.71
LDLRP01130 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 PART1_2.1-201ENST00000612397 250 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.39□□□□□ -1.71
LDLRP01130 AL355493.4-201ENST00000618530 292 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AP006248.2-201ENST00000623309 592 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC104985.3-201ENST00000623479 597 ntBASIC4.39□□□□□ -1.71
LDLRP01130 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.39□□□□□ -1.71
LDLRP01130 MTND4P31-201ENST00000425607 1343 ntBASIC4.39□□□□□ -1.71
LDLRP01130 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.39□□□□□ -1.71
LDLRP01130 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LDLRP01130 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
LDLRP01130 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 AL592182.3-201ENST00000642132 3304 ntBASIC4.38□□□□□ -1.71
LDLRP01130 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 MIR448-201ENST00000362131 111 ntBASIC4.38□□□□□ -1.71
LDLRP01130 RNU6-1339P-201ENST00000363574 91 ntBASIC4.38□□□□□ -1.71
LDLRP01130 SNORD113.2-201ENST00000364166 89 ntBASIC4.38□□□□□ -1.71
LDLRP01130 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 MIR92A2-201ENST00000385299 75 ntBASIC4.38□□□□□ -1.71
LDLRP01130 Y_RNA.578-201ENST00000390903 88 ntBASIC4.38□□□□□ -1.71
LDLRP01130 HSPD1P16-201ENST00000402302 394 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AL121834.1-202ENST00000404494 277 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AL160275.2-201ENST00000412010 394 ntBASIC4.38□□□□□ -1.71
LDLRP01130 GSTM3P2-201ENST00000412746 530 ntBASIC4.38□□□□□ -1.71
LDLRP01130 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 CYP4F29P-201ENST00000420685 446 ntBASIC4.38□□□□□ -1.71
LDLRP01130 GAPDHP49-201ENST00000421421 961 ntBASIC4.38□□□□□ -1.71
LDLRP01130 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 RPL21P91-201ENST00000429231 479 ntBASIC4.38□□□□□ -1.71
LDLRP01130 BMS1P19-201ENST00000433925 393 ntBASIC4.38□□□□□ -1.71
LDLRP01130 ELOCP11-201ENST00000436690 332 ntBASIC4.38□□□□□ -1.71
LDLRP01130 ELOCP16-201ENST00000444494 332 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AL358794.1-201ENST00000445689 381 ntBASIC4.38□□□□□ -1.71
LDLRP01130 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 CDC42P1-201ENST00000456658 548 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AC109327.1-201ENST00000471666 403 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.38□□□□□ -1.71
LDLRP01130 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.38□□□□□ -1.71
LDLRP01130 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.38□□□□□ -1.71
LDLRP01130 AC117522.2-201ENST00000510049 657 ntBASIC4.38□□□□□ -1.71
LDLRP01130 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.38□□□□□ -1.71
LDLRP01130 MYL12AP1-201ENST00000518490 515 ntBASIC4.38□□□□□ -1.71
LDLRP01130 IGKV2-36-201ENST00000519999 223 ntBASIC4.38□□□□□ -1.71
LDLRP01130 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 IGLV3-26-201ENST00000520756 302 ntBASIC4.38□□□□□ -1.71
LDLRP01130 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.38□□□□□ -1.71
LDLRP01130 OR8G5-201ENST00000524943 1041 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.38□□□□□ -1.71
LDLRP01130 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.38□□□□□ -1.71
LDLRP01130 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AC007224.1-201ENST00000564410 144 ntBASIC4.38□□□□□ -1.71
LDLRP01130 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 RPP40P2-201ENST00000603596 712 ntBASIC4.38□□□□□ -1.71
LDLRP01130 BNIP3P4-201ENST00000604946 565 ntBASIC4.38□□□□□ -1.71
LDLRP01130 RNU4-5P-201ENST00000607255 135 ntBASIC4.38□□□□□ -1.71
LDLRP01130 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 CR381572.2-201ENST00000624852 397 ntBASIC4.38□□□□□ -1.71
LDLRP01130 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 BX649567.1-201ENST00000642071 1134 ntBASIC4.38□□□□□ -1.71
LDLRP01130 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LDLRP01130 AL031119.1-201ENST00000404707 1879 ntBASIC4.38□□□□□ -1.71
LDLRP01130 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
LDLRP01130 AL355578.1-201ENST00000607405 1328 ntBASIC4.38□□□□□ -1.71
LDLRP01130 AC104446.1-201ENST00000613728 1321 ntBASIC4.38□□□□□ -1.71
LDLRP01130 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LDLRP01130 AC096656.1-201ENST00000623826 1364 ntBASIC4.38□□□□□ -1.71
LDLRP01130 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LDLRP01130 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms