Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN9O95484 USP12PY-201ENST00000427677 1064 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN9O95484 RSL24D1P8-201ENST00000434442 492 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AC105402.2-201ENST00000438503 358 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AL691517.1-201ENST00000440833 1235 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 AL500522.2-201ENST00000448562 343 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 TPRKBP1-201ENST00000456243 481 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AC026402.1-201ENST00000513642 170 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AC010342.1-201ENST00000514047 877 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CLDN9O95484 AC026616.1-201ENST00000523157 525 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AC138701.1-201ENST00000524329 714 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN9O95484 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN9O95484 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN9O95484 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CLDN9O95484 AC018618.2-201ENST00000604770 446 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN9O95484 AC090506.2-201ENST00000624521 419 ntBASIC3.81□□□□□ -1.8
CLDN9O95484 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN9O95484 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.81□□□□□ -1.8
CLDN9O95484 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.81□□□□□ -1.8
CLDN9O95484 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.81□□□□□ -1.8
CLDN9O95484 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN9O95484 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN9O95484 SAGE2P-201ENST00000420011 2126 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLDN9O95484 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN9O95484 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN9O95484 METTL21EP-201ENST00000298105 713 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLDN9O95484 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 RN7SKP227-201ENST00000364445 330 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN9O95484 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.8□□□□□ -1.8
CLDN9O95484 VTA1P1-201ENST00000414044 866 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 TCEA1P4-201ENST00000415066 844 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 RPS12P23-201ENST00000419579 400 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN9O95484 RANP8-201ENST00000444720 713 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN9O95484 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN9O95484 MTND2P3-201ENST00000452458 470 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 RNA5SP179-201ENST00000517284 121 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN9O95484 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN9O95484 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLDN9O95484 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 AL360157.1-201ENST00000565962 87 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AP000919.1-202ENST00000581139 1264 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN9O95484 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN9O95484 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN9O95484 AC091167.4-201ENST00000605079 184 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 RNU4-89P-201ENST00000607443 133 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC006946.3-201ENST00000609791 756 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 AC006338.2-201ENST00000616864 791 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 AC008725.1-201ENST00000605123 2263 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN9O95484 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN9O95484 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN9O95484 HSPA8P19-201ENST00000505359 1517 ntBASIC3.8□□□□□ -1.8
CLDN9O95484 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN9O95484 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN9O95484 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN9O95484 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 RNA5SP391-201ENST00000363456 119 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AL356057.1-202ENST00000402263 756 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 RN7SKP56-201ENST00000410513 331 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC004987.3-201ENST00000413879 771 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN9O95484 ARL2BPP3-201ENST00000421226 480 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AL691449.1-201ENST00000426570 421 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 ZFAND6P1-201ENST00000434138 605 ntBASIC3.79□□□□□ -1.8
CLDN9O95484 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN9O95484 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN9O95484 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms