Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC010329.2-201ENST00000595195 2737 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 SCARNA15-201ENST00000607520 4325 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 RNU1-149P-201ENST00000390870 161 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 VDAC2P1-201ENST00000399358 958 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 RPS4XP9-201ENST00000405151 780 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 U3.32-201ENST00000408116 212 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 MTCO3P41-201ENST00000414801 328 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 RPL23AP39-201ENST00000415533 405 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 BOLA3P4-201ENST00000418151 400 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 RPS3AP44-201ENST00000425466 790 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC104837.2-201ENST00000427236 424 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 IFNNP1-201ENST00000429219 553 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AL513175.1-201ENST00000431492 780 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4BO75351 RPS24P1-201ENST00000438550 371 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 RAB11AP1-201ENST00000442978 646 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4BO75351 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 RPS3AP41-201ENST00000462701 778 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 UBA52P3-201ENST00000491303 382 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 RN7SL441P-201ENST00000492388 296 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4BO75351 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 Y_RNA.695-201ENST00000516715 107 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 RN7SKP147-201ENST00000517154 244 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 RNU6-1261P-201ENST00000517194 104 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4BO75351 RPL23AP53-201ENST00000521854 457 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 SMARCE1P4-201ENST00000523647 241 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AP001207.1-201ENST00000524051 481 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4BO75351 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS4BO75351 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4BO75351 EDDM3DP-201ENST00000554692 434 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AL391156.1-201ENST00000554965 554 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC127381.1-201ENST00000555979 939 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4BO75351 AC079075.1-201ENST00000559543 878 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AGGF1P4-201ENST00000568249 801 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AP001094.1-201ENST00000579805 193 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS4BO75351 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 AC004987.4-201ENST00000603383 338 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC091946.2-201ENST00000606105 291 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC245297.2-201ENST00000610119 565 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 MIR378J-201ENST00000611988 109 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 EIF3FP1-201ENST00000613970 806 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 MIR7844-201ENST00000616161 122 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC009878.1-201ENST00000621819 340 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS4BO75351 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS4BO75351 AC026634.1-201ENST00000634369 198 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC084035.1-201ENST00000634543 607 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AC090582.1-201ENST00000636321 199 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 LINC01739-205ENST00000641890 573 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4BO75351 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 MAPK10-320ENST00000641462 6696 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4BO75351 AC063976.2-201ENST00000425667 3556 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 AL022393.1-201ENST00000625142 1677 ntBASIC4.99□□□□□ -1.61
VPS4BO75351 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4BO75351 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4BO75351 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 ZNF652P1-201ENST00000442420 1309 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC107982.1-201ENST00000507171 1300 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS4BO75351 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 RNU6-492P-201ENST00000363035 104 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 RNU4-44P-201ENST00000363050 141 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms