Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RN7SKP53-201ENST00000411337 315 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.82□□□□□ -1.96
SSSCA1O60232 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.82□□□□□ -1.96
SSSCA1O60232 MTND2P15-201ENST00000418575 892 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AIMP1P1-201ENST00000418670 937 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 RCC2P2-201ENST00000422174 918 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AL591419.1-201ENST00000427423 339 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AC022022.1-201ENST00000430304 178 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.82□□□□□ -1.96
SSSCA1O60232 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.82□□□□□ -1.96
SSSCA1O60232 AL035404.1-201ENST00000497982 568 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AC108078.3-201ENST00000502633 489 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.82□□□□□ -1.96
SSSCA1O60232 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.82□□□□□ -1.96
SSSCA1O60232 FTH1P21-201ENST00000512179 511 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AC093331.1-201ENST00000521474 169 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AC104027.1-201ENST00000521887 300 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.82□□□□□ -1.96
SSSCA1O60232 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.82□□□□□ -1.96
SSSCA1O60232 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.82□□□□□ -1.96
SSSCA1O60232 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.82□□□□□ -1.96
SSSCA1O60232 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.82□□□□□ -1.96
SSSCA1O60232 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.82□□□□□ -1.96
SSSCA1O60232 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.82□□□□□ -1.96
SSSCA1O60232 AL606490.9-201ENST00000603331 271 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.82□□□□□ -1.96
SSSCA1O60232 AC099778.2-201ENST00000610904 211 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 MIR8058-201ENST00000615737 89 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 OR52H1-202ENST00000641796 1061 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 ZNF542P-204ENST00000482727 1305 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AP004289.2-201ENST00000444413 1457 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 AL592494.2-201ENST00000425455 1548 ntBASIC2.82□□□□□ -1.96
SSSCA1O60232 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.82□□□□□ -1.96
SSSCA1O60232 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SSSCA1O60232 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.81□□□□□ -1.96
SSSCA1O60232 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
SSSCA1O60232 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.81□□□□□ -1.96
SSSCA1O60232 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
SSSCA1O60232 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 RNU6-213P-201ENST00000384051 104 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.81□□□□□ -1.96
SSSCA1O60232 AC007390.1-201ENST00000415722 356 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC096644.3-201ENST00000416788 338 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC245054.1-201ENST00000420944 258 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 GTF2IP23-201ENST00000423746 351 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.81□□□□□ -1.96
SSSCA1O60232 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.81□□□□□ -1.96
SSSCA1O60232 ISCA1P2-201ENST00000438679 421 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.81□□□□□ -1.96
SSSCA1O60232 AC018635.1-201ENST00000468292 1030 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 RN7SL330P-201ENST00000469709 307 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AP000893.1-201ENST00000474462 794 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC117394.1-201ENST00000477323 567 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.81□□□□□ -1.96
SSSCA1O60232 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.81□□□□□ -1.96
SSSCA1O60232 HMGB1P21-201ENST00000502313 581 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 UBE2CP3-201ENST00000502715 450 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.81□□□□□ -1.96
SSSCA1O60232 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.81□□□□□ -1.96
SSSCA1O60232 AC068657.1-201ENST00000520807 306 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.81□□□□□ -1.96
SSSCA1O60232 CYCSP30-201ENST00000546447 172 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.81□□□□□ -1.96
SSSCA1O60232 AC087499.8-201ENST00000578406 226 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.81□□□□□ -1.96
SSSCA1O60232 RN7SL753P-201ENST00000581238 290 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.81□□□□□ -1.96
SSSCA1O60232 MIR3939-201ENST00000582614 106 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 KPNA2P3-201ENST00000584190 848 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.81□□□□□ -1.96
SSSCA1O60232 AC068790.4-201ENST00000602474 263 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 AL591034.3-201ENST00000605511 685 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.81□□□□□ -1.96
SSSCA1O60232 AC092628.2-201ENST00000622492 339 ntBASIC2.81□□□□□ -1.96
SSSCA1O60232 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC2.81□□□□□ -1.96
SSSCA1O60232 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.81□□□□□ -1.96
SSSCA1O60232 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
SSSCA1O60232 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SSSCA1O60232 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 AC010329.2-201ENST00000595195 2737 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SSSCA1O60232 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 RAD1P1-201ENST00000231383 813 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSSCA1O60232 FRG1CP-201ENST00000358464 769 ntBASIC2.8□□□□□ -1.96
SSSCA1O60232 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.8□□□□□ -1.96
SSSCA1O60232 RPL7P60-201ENST00000397636 735 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms