Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MTND2P21-201ENST00000436242 1042 ntBASIC4.19□□□□□ -1.74
MSH4O15457 ELOCP10-201ENST00000440624 327 ntBASIC4.19□□□□□ -1.74
MSH4O15457 RNU7-27P-201ENST00000459281 62 ntBASIC4.19□□□□□ -1.74
MSH4O15457 UBA52P3-201ENST00000491303 382 ntBASIC4.19□□□□□ -1.74
MSH4O15457 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.19□□□□□ -1.74
MSH4O15457 AC108120.2-201ENST00000512973 294 ntBASIC4.19□□□□□ -1.74
MSH4O15457 RNU6-362P-201ENST00000516736 90 ntBASIC4.19□□□□□ -1.74
MSH4O15457 OR7E13P-201ENST00000526052 910 ntBASIC4.19□□□□□ -1.74
MSH4O15457 AC008011.1-201ENST00000545989 227 ntBASIC4.19□□□□□ -1.74
MSH4O15457 AC074050.1-201ENST00000563247 211 ntBASIC4.19□□□□□ -1.74
MSH4O15457 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.19□□□□□ -1.74
MSH4O15457 AL049844.2-201ENST00000604280 628 ntBASIC4.19□□□□□ -1.74
MSH4O15457 ELOCP34-201ENST00000604436 327 ntBASIC4.19□□□□□ -1.74
MSH4O15457 AC245389.1-201ENST00000605141 529 ntBASIC4.19□□□□□ -1.74
MSH4O15457 AL162233.1-201ENST00000620014 944 ntBASIC4.19□□□□□ -1.74
MSH4O15457 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.19□□□□□ -1.74
MSH4O15457 AC018555.1-201ENST00000567548 1980 ntBASIC4.19□□□□□ -1.74
MSH4O15457 MFSD8-236ENST00000641509 4050 ntBASIC4.19□□□□□ -1.74
MSH4O15457 CYP1D1P-201ENST00000416662 1433 ntBASIC4.19□□□□□ -1.74
MSH4O15457 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
MSH4O15457 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
MSH4O15457 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH4O15457 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH4O15457 MTND4P26-201ENST00000415971 1359 ntBASIC4.18□□□□□ -1.74
MSH4O15457 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.18□□□□□ -1.74
MSH4O15457 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 RNU6-304P-201ENST00000364855 107 ntBASIC4.18□□□□□ -1.74
MSH4O15457 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 ATP5F1P3-201ENST00000397213 657 ntBASIC4.18□□□□□ -1.74
MSH4O15457 RANP4-201ENST00000413361 655 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AL035423.1-201ENST00000420331 213 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH4O15457 GOT2P5-201ENST00000433995 546 ntBASIC4.18□□□□□ -1.74
MSH4O15457 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH4O15457 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH4O15457 AC044797.1-201ENST00000445744 679 ntBASIC4.18□□□□□ -1.74
MSH4O15457 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.18□□□□□ -1.74
MSH4O15457 SUMO1P1-201ENST00000497904 306 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AC010342.1-201ENST00000514047 877 ntBASIC4.18□□□□□ -1.74
MSH4O15457 RNU6-347P-201ENST00000516658 105 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AC026616.1-201ENST00000523157 525 ntBASIC4.18□□□□□ -1.74
MSH4O15457 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH4O15457 AC008083.2-201ENST00000546707 476 ntBASIC4.18□□□□□ -1.74
MSH4O15457 HNRNPCP4-201ENST00000571636 900 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.18□□□□□ -1.74
MSH4O15457 MTCO3P22-201ENST00000603219 784 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AC123786.2-201ENST00000603459 275 ntBASIC4.18□□□□□ -1.74
MSH4O15457 BRDTP1-201ENST00000605735 677 ntBASIC4.18□□□□□ -1.74
MSH4O15457 uc_338.9-201ENST00000617424 182 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AC067931.1-201ENST00000624190 671 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AC091905.1-201ENST00000624400 311 ntBASIC4.18□□□□□ -1.74
MSH4O15457 AC119674.1-207ENST00000641355 633 ntBASIC4.18□□□□□ -1.74
MSH4O15457 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.18□□□□□ -1.74
MSH4O15457 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.18□□□□□ -1.74
MSH4O15457 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MSH4O15457 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.18□□□□□ -1.74
MSH4O15457 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH4O15457 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
MSH4O15457 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH4O15457 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MSH4O15457 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
MSH4O15457 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH4O15457 AL451142.2-201ENST00000429076 2090 ntBASIC4.17□□□□□ -1.74
MSH4O15457 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
MSH4O15457 AC090971.4-201ENST00000560291 1800 ntBASIC4.17□□□□□ -1.74
MSH4O15457 SNORA5A-201ENST00000384111 134 ntBASIC4.17□□□□□ -1.74
MSH4O15457 RNU6-40P-201ENST00000384254 107 ntBASIC4.17□□□□□ -1.74
MSH4O15457 PTMAP2-201ENST00000397627 327 ntBASIC4.17□□□□□ -1.74
MSH4O15457 CCNB2P1-201ENST00000399411 1150 ntBASIC4.17□□□□□ -1.74
MSH4O15457 RNA5SP498-201ENST00000411342 120 ntBASIC4.17□□□□□ -1.74
MSH4O15457 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH4O15457 AL353597.2-202ENST00000434901 373 ntBASIC4.17□□□□□ -1.74
MSH4O15457 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH4O15457 AC004069.2-201ENST00000505438 1114 ntBASIC4.17□□□□□ -1.74
MSH4O15457 MTCO1P31-201ENST00000506355 492 ntBASIC4.17□□□□□ -1.74
MSH4O15457 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
MSH4O15457 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH4O15457 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH4O15457 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH4O15457 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.17□□□□□ -1.74
MSH4O15457 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.17□□□□□ -1.74
MSH4O15457 AC015802.5-201ENST00000607478 399 ntBASIC4.17□□□□□ -1.74
MSH4O15457 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.17□□□□□ -1.74
MSH4O15457 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MSH4O15457 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
MSH4O15457 DDX18P3-201ENST00000404856 2007 ntBASIC4.17□□□□□ -1.74
MSH4O15457 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MSH4O15457 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MSH4O15457 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.17□□□□□ -1.74
MSH4O15457 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
MSH4O15457 AL161912.2-201ENST00000565707 3007 ntBASIC4.16□□□□□ -1.74
MSH4O15457 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.16□□□□□ -1.74
MSH4O15457 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
MSH4O15457 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
MSH4O15457 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms