Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 DBF4P1-201ENST00000412976 1892 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
FOXN3O00409 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FOXN3O00409 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXN3O00409 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXN3O00409 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
FOXN3O00409 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 RNU1-82P-201ENST00000390851 165 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL590762.2-201ENST00000395798 571 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 ATP5F1P3-201ENST00000397213 657 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 HSPD1P16-201ENST00000402302 394 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL589647.1-201ENST00000402485 466 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL359643.1-201ENST00000404109 423 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL080315.1-201ENST00000406055 466 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 AC008280.1-201ENST00000418851 412 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXN3O00409 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXN3O00409 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXN3O00409 AL445433.1-201ENST00000457507 257 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 RPL21P71-201ENST00000465598 459 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AC108751.2-201ENST00000469993 231 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXN3O00409 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXN3O00409 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 RN7SKP31-201ENST00000516354 278 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 RNA5SP360-201ENST00000516555 118 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.09□□□□□ -1.59
FOXN3O00409 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXN3O00409 AC008015.1-201ENST00000555505 465 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AGGF1P8-201ENST00000562979 1000 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.09□□□□□ -1.59
FOXN3O00409 MIR4504-201ENST00000577413 92 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 OR4K7P-201ENST00000580232 945 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXN3O00409 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXN3O00409 Z94722.1-201ENST00000604328 474 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL022161.1-201ENST00000604390 213 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AC064807.4-201ENST00000607201 407 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL607023.1-201ENST00000620045 248 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AL359757.1-201ENST00000623176 255 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AP006248.2-201ENST00000623309 592 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXN3O00409 MKKS-204ENST00000639674 192 ntBASIC5.09□□□□□ -1.59
FOXN3O00409 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FOXN3O00409 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FOXN3O00409 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
FOXN3O00409 AC025125.1-201ENST00000624743 1922 ntBASIC5.09□□□□□ -1.6
FOXN3O00409 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
FOXN3O00409 AC126323.6-202ENST00000568092 3511 ntBASIC5.09□□□□□ -1.6
FOXN3O00409 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
FOXN3O00409 AP001642.1-201ENST00000624727 2117 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
FOXN3O00409 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXN3O00409 RNA5SP191-201ENST00000362585 102 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 Y_RNA.311-201ENST00000365068 96 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 AC234781.2-201ENST00000426370 994 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 IFNNP1-201ENST00000429219 553 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXN3O00409 RPS26P2-201ENST00000440331 348 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXN3O00409 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.08□□□□□ -1.6
FOXN3O00409 AL109741.2-201ENST00000455561 343 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 RPS5P7-201ENST00000456664 608 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 CYCSP34-201ENST00000458172 304 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 RNA5SP103-201ENST00000459503 118 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXN3O00409 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXN3O00409 AC013828.1-201ENST00000481845 158 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 BET1P1-201ENST00000482276 359 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.08□□□□□ -1.6
FOXN3O00409 AC073358.1-201ENST00000505671 684 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 AC104090.1-201ENST00000506341 1171 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
FOXN3O00409 MRPS33P3-201ENST00000513456 322 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXN3O00409 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXN3O00409 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXN3O00409 TRAV15-201ENST00000556680 249 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXN3O00409 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXN3O00409 AL109653.1-201ENST00000603091 248 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXN3O00409 AC087385.3-201ENST00000620477 187 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 AC018445.2-201ENST00000622987 260 ntBASIC5.08□□□□□ -1.6
FOXN3O00409 AC010608.2-201ENST00000624830 470 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms