Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 snoU13.24-201ENST00000458998 104 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 RPL21P71-201ENST00000465598 459 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 ATG10-AS1-201ENST00000504846 648 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 KRT19P6-201ENST00000510983 209 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 NPM1P52-201ENST00000518264 846 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 IGKV2-23-201ENST00000518729 323 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 NDUFA5P2-201ENST00000519723 344 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC022387.2-201ENST00000604050 448 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL034408.1-202ENST00000636088 415 ntBASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TMX2-CTNND1H3BSU7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.78□□□□□ -1.81
TMX2-CTNND1H3BSU7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC007342.7-201ENST00000624610 2337 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 XIAPP3-201ENST00000312918 795 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC093719.1-202ENST00000392735 373 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 KRR1P1-201ENST00000419430 803 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 RPS26P47-201ENST00000427219 348 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 TBCAP1-201ENST00000436520 327 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 NANOGP10-201ENST00000453325 895 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 TPRKBP1-201ENST00000456243 481 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 RPL7P49-201ENST00000471402 708 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC093853.1-201ENST00000515689 483 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 YPEL5P3-201ENST00000547227 352 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC104662.1-201ENST00000604448 511 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC069200.1-201ENST00000609511 323 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 MAPK10-373ENST00000641983 6772 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 BX005019.1-201ENST00000561881 1810 ntBASIC3.77□□□□□ -1.81
TMX2-CTNND1H3BSU7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 ZNF285B-201ENST00000561698 1767 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 RPL21P17-201ENST00000397467 475 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 MTND3P20-201ENST00000407663 186 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC098592.2-201ENST00000413158 265 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 RPL30P2-201ENST00000414021 291 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL356806.1-201ENST00000422524 916 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL591419.1-201ENST00000427423 339 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 VN1R25P-201ENST00000443385 738 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC017099.1-201ENST00000448261 1028 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL500527.1-201ENST00000448532 255 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms