Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RNU6-28P-201ENST00000362378 107 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RNU1-49P-201ENST00000363468 159 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RN7SKP128-201ENST00000364270 303 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RNU6-996P-201ENST00000365438 107 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 Y_RNA.387-201ENST00000383918 102 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 MIR606-201ENST00000384851 96 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC007283.2-201ENST00000424739 197 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC024082.2-201ENST00000434771 238 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AL356276.2-201ENST00000435919 558 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 HMGB1P18-201ENST00000438801 619 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 CEACAMP9-201ENST00000442990 513 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AL845321.1-201ENST00000444603 348 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RPL23AP60-201ENST00000450011 454 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 HMGN2P26-201ENST00000463169 339 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC022730.1-201ENST00000473114 568 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC078785.3-201ENST00000476607 425 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RN7SL70P-201ENST00000478322 302 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RPL32P9-201ENST00000487963 407 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 RNU6-1220P-201ENST00000517126 108 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 SUB1P1-201ENST00000524415 382 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 OR5BN1P-201ENST00000532955 829 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC089984.3-201ENST00000552838 363 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC068831.4-201ENST00000556118 109 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC012182.1-201ENST00000570133 895 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC006504.6-201ENST00000590142 199 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC008638.3-201ENST00000603341 463 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AL391813.2-201ENST00000609113 322 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC009318.4-201ENST00000620496 486 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 SNX18P12-201ENST00000624821 759 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 CYP3A51P-201ENST00000633513 256 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC079776.5-201ENST00000641920 211 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 AC093671.1-201ENST00000624981 2929 ntBASIC5.3□□□□□ -1.56
SHISA3A0PJX4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHISA3A0PJX4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC092079.1-201ENST00000558620 1985 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 Y_RNA.184-201ENST00000363884 108 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 RNY4P16-201ENST00000364768 94 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 RN7SKP6-201ENST00000364795 319 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 Y_RNA.422-201ENST00000384054 114 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 MIR1-2-201ENST00000384961 85 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AL591416.1-201ENST00000404015 867 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms