Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC135628.1-201ENST00000568867 534 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AP005119.2-201ENST00000579735 1105 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC022726.1-201ENST00000587475 207 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 BNIP3P26-201ENST00000600827 554 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 RPL26P30-202ENST00000602923 645 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC106791.2-201ENST00000604680 391 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AC124312.4-201ENST00000605533 310 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 LINC01109-201ENST00000603837 3081 ntBASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX2IPQ9Y2D8 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RNU6-707P-201ENST00000364647 95 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 ATP5F1P3-201ENST00000397213 657 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RNA5SP345-201ENST00000410646 108 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RN7SKP222-201ENST00000410651 315 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RN7SKP106-201ENST00000410832 272 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 TBCAP2-201ENST00000416175 326 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC069213.2-201ENST00000420238 366 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 HMGB1P45-201ENST00000435986 653 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 MTCYBP34-201ENST00000439552 670 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC010733.1-201ENST00000451515 401 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL109741.2-201ENST00000455561 343 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RPS23P7-201ENST00000466210 444 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 MTND4LP3-201ENST00000468320 276 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC117532.1-201ENST00000514638 323 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RNA5SP464-201ENST00000516251 108 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RNU1-6P-201ENST00000516290 144 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RNU6-232P-201ENST00000517144 64 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC009643.1-201ENST00000532030 391 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 NIFKP8-201ENST00000560500 874 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC090616.2-202ENST00000584248 222 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC104687.2-201ENST00000604442 342 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AL023881.1-201ENST00000621088 301 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC010608.2-201ENST00000624830 470 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC092608.3-201ENST00000625017 386 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 KARSP3-201ENST00000571212 1504 ntBASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSX2IPQ9Y2D8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 AP001273.1-201ENST00000624493 3152 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 Y_RNA.201-201ENST00000364052 96 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 RNU6-304P-201ENST00000364855 107 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 SNORA70F-201ENST00000384142 135 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 SNORA11C-201ENST00000408532 129 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 RN7SKP16-201ENST00000410180 299 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 AC007435.1-201ENST00000421086 415 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 RPS27AP7-201ENST00000422792 455 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 RPL18P10-201ENST00000425606 538 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 AL593851.1-201ENST00000426171 157 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 RPP40P1-201ENST00000426762 456 ntBASIC5.16□□□□□ -1.58
SSX2IPQ9Y2D8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms