Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 OR1S2-201ENST00000302592 978 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 MIR375-201ENST00000362103 64 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 GNG5P2-201ENST00000372054 207 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 RNU6-746P-201ENST00000384112 109 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 Y_RNA.447-201ENST00000384184 113 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 NACAP7-201ENST00000407371 609 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 TPMTP2-201ENST00000414372 726 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AC004690.1-201ENST00000418216 328 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AC093155.2-201ENST00000420734 937 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 RPL34P27-201ENST00000428810 349 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 MTND6P13-201ENST00000443510 523 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 SBDSP1-204ENST00000453858 737 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 RNU6-329P-201ENST00000459618 107 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 RPL7P15-201ENST00000461190 712 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AC090589.1-201ENST00000473109 362 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 Y_RNA.710-201ENST00000516975 110 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 SNORA25.17-201ENST00000517184 124 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 CYCSP22-201ENST00000517555 339 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 IGKV2-19-201ENST00000518132 283 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 IGKV2-18-201ENST00000522607 343 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 MIR1273E-201ENST00000581165 102 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 SUMO2P15-201ENST00000604285 278 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AL589674.2-201ENST00000604304 337 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 PRR13P7-201ENST00000605538 430 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 SDR42E1P1-201ENST00000611327 477 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 DISC2.1-201ENST00000612827 205 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AC107871.2-201ENST00000612894 502 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 RMST_9.1-201ENST00000619945 193 ntBASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PDZRN3Q9UPQ7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 RNF6P1-201ENST00000444889 1784 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 RN7SKP160-201ENST00000363804 340 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 SNRPFP1-201ENST00000414761 252 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 NDUFB4P5-201ENST00000415445 361 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 PTP4A1P1-201ENST00000420539 515 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC092651.1-201ENST00000426110 312 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 GEMIN2P1-201ENST00000454246 752 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 CYP4F27P-201ENST00000514557 494 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 RN7SKP67-201ENST00000515905 235 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 RNU4-49P-201ENST00000516080 140 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 RN7SKP295-201ENST00000517264 153 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 IGLV2-28-201ENST00000520681 304 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AL845331.3-202ENST00000562856 261 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC034105.3-201ENST00000565294 442 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 MIR132-201ENST00000591554 101 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC104687.2-201ENST00000604442 342 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 ATP1B3P1-201ENST00000605365 821 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC027088.4-201ENST00000611559 1947 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 AC024587.1-201ENST00000505925 2157 ntBASIC7.69□□□□□ -1.18
PDZRN3Q9UPQ7 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms