Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-562P-201ENST00000362731 107 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 Y_RNA.65-201ENST00000362846 100 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 RPL31P50-201ENST00000471002 296 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC015724.1-201ENST00000478577 156 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC079080.1-201ENST00000479841 822 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-346P-201ENST00000516288 111 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-313P-201ENST00000516317 112 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 RNU1-54P-201ENST00000517181 120 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 TRIM77BP-201ENST00000524985 1119 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC090502.2-201ENST00000549267 280 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC128657.1-201ENST00000549459 145 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC018552.3-201ENST00000567416 561 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 MIR4703-201ENST00000577728 79 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 MIR5095-201ENST00000578844 88 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 OR6R2P-201ENST00000609216 300 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC093799.2-201ENST00000610062 578 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 MIR6889-201ENST00000613185 59 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC018445.2-201ENST00000622987 260 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 LINC02495-203ENST00000636704 242 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 SPATA31C1-201ENST00000420021 3895 ntBASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM35Q9UPQ4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC010624.4-201ENST00000597606 1351 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 MELK-207ENST00000536860 2342 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 RN7SKP184-201ENST00000362348 333 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-657P-201ENST00000383904 107 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 Y_RNA.551-201ENST00000384661 102 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 HMGB3P7-201ENST00000400214 611 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 RPSAP65-201ENST00000429660 595 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC093716.1-201ENST00000435923 377 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC245291.3-201ENST00000443400 292 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 PSMA2P2-201ENST00000504319 686 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AP006587.4-201ENST00000526053 529 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC087441.2-201ENST00000529141 262 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AP001823.1-201ENST00000604056 1003 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC019257.2-201ENST00000605539 497 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC010424.2-201ENST00000607594 443 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AL589743.6-201ENST00000611025 117 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 HYDIN2-203ENST00000614586 13885 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AC005332.9-201ENST00000620266 2921 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AL442639.1-201ENST00000625030 1899 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 AL161912.4-201ENST00000623889 2468 ntBASIC8.51□□□□□ -1.05
TRIM35Q9UPQ4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC130304.1-201ENST00000622942 2385 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 AC022905.1-201ENST00000503430 3048 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 Y_RNA.22-201ENST00000362492 102 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RNU5B-2P-201ENST00000363036 113 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RN7SKP162-201ENST00000363605 345 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RNA5SP512-201ENST00000364550 120 ntBASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
TRIM35Q9UPQ4 RNU6-1029P-201ENST00000384109 107 ntBASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms