Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 VN1R88P-201ENST00000596787 292 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL592221.1-201ENST00000605266 382 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL451074.6-201ENST00000608512 729 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AF246928.1-201ENST00000623768 87 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AL022322.2-201ENST00000624072 20397 ntBASIC5.06□□□□□ -1.6
DKK3Q9UBP4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DKK3Q9UBP4 AC092079.1-201ENST00000558620 1985 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL137100.1-201ENST00000556703 1620 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 OR1L1-202ENST00000373686 1083 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RNU6-98P-201ENST00000384173 107 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 SNORA51.8-201ENST00000384234 132 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RNU6-225P-201ENST00000384613 103 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL031577.2-201ENST00000404133 280 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RNU6-77P-201ENST00000410554 91 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 CHEK2P3-201ENST00000416118 248 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 P2RY10P2-201ENST00000416730 913 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 PRELID3BP10-201ENST00000431957 584 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC092013.1-201ENST00000438795 332 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL137845.2-201ENST00000444292 988 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RPL12P26-201ENST00000452430 487 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RPL5P24-201ENST00000463742 885 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RPL7P18-201ENST00000478965 734 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RN7SL319P-201ENST00000480656 221 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC111193.1-201ENST00000504097 155 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC005178.1-201ENST00000508392 440 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC079395.1-201ENST00000510981 262 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC008494.2-201ENST00000514544 370 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 HNRNPKP5-201ENST00000515300 253 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RNA5SP464-201ENST00000516251 108 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC100784.1-201ENST00000522790 310 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 HIGD1AP17-201ENST00000554576 276 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 MIR548Y-201ENST00000582739 110 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RN7SL52P-201ENST00000584271 284 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 RN7SL435P-201ENST00000584418 282 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 PRPF19P1-201ENST00000584766 898 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC011453.2-201ENST00000603737 729 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC245297.2-201ENST00000610119 565 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC097505.1-201ENST00000610199 565 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL049536.1-201ENST00000625043 744 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC084035.1-201ENST00000634543 607 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AL392088.2-201ENST00000637607 285 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 CR381670.1-201ENST00000624291 1693 ntBASIC5.05□□□□□ -1.6
DKK3Q9UBP4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.05□□□□□ -1.6
DKK3Q9UBP4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 MTND4P26-201ENST00000415971 1359 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC009229.4-201ENST00000623854 1947 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 IL6STP1-201ENST00000346911 1020 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 RNU6-931P-201ENST00000363850 107 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 MIR708-201ENST00000390708 88 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 RPL26P29-201ENST00000415623 438 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms