Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC008638.3-201ENST00000603341 463 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AL162574.2-201ENST00000614618 657 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AL356489.2-201ENST00000566968 3528 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 ASNSP1-201ENST00000518311 1939 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 FAM91A3P-201ENST00000456826 2544 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 ASNSP1-204ENST00000641977 1664 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 MARK2P15-201ENST00000432204 2186 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 RNA5SP52-201ENST00000362448 134 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 RNA5SP399-201ENST00000364003 117 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 RN7SKP202-201ENST00000410439 330 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 RN7SKP159-201ENST00000410657 292 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 MTND4P11-201ENST00000417020 1058 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 SEC63P1-201ENST00000425785 1258 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 MORF4L1P7-201ENST00000426038 703 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC092685.1-201ENST00000447960 1243 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC104306.1-201ENST00000449702 371 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AL353718.1-201ENST00000451028 517 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 FABP3P2-201ENST00000453169 399 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 MTND2P30-201ENST00000456663 382 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 RN7SL585P-201ENST00000470538 280 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 NPM1P17-201ENST00000479221 602 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 RNA5SP179-201ENST00000517284 121 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AP002812.4-201ENST00000532139 286 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 HSPE1P5-201ENST00000561489 272 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 MIR5685-201ENST00000579080 79 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 MIR1254-2-201ENST00000579553 63 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC090312.1-201ENST00000580637 348 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC104662.1-201ENST00000604448 511 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC018618.2-201ENST00000604770 446 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC099669.2-201ENST00000616549 437 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AL354798.1-201ENST00000622505 329 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AC116563.2-201ENST00000624751 535 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 AL118496.1-201ENST00000440201 1812 ntBASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCF1Q9UBD9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC074029.4-201ENST00000624796 1859 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC114546.3-201ENST00000623582 1734 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AL590290.1-201ENST00000405336 380 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 HIGD1AP4-201ENST00000430194 280 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 HLA-N-201ENST00000437516 135 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AL353093.1-201ENST00000441292 436 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC097499.1-201ENST00000444277 208 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC239809.1-201ENST00000450470 217 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 TPMTP4-201ENST00000450749 678 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms