Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC026784.1-201ENST00000507986 352 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 RFPL1S-203ENST00000539579 330 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC090877.1-201ENST00000561418 344 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 ELOCP35-201ENST00000604289 336 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AL354976.1-201ENST00000613843 387 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 FRG1CP-201ENST00000358464 769 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 ZNF602P-201ENST00000405929 924 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC096644.3-201ENST00000416788 338 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC234781.4-201ENST00000419384 244 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 HMGN1P11-201ENST00000508668 303 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC012314.7-201ENST00000619693 93 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 BMS1P21-201ENST00000634565 365 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AL133412.1-201ENST00000380194 2992 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 MTND5P23-201ENST00000430812 1655 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 MIR199A2-201ENST00000385289 110 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AL136116.1-201ENST00000403591 381 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AL138878.1-201ENST00000405131 347 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 RPS3AP12-201ENST00000443616 753 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 APOOP2-201ENST00000461561 539 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC093663.1-201ENST00000497190 394 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 RN7SKP209-201ENST00000516888 304 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 MIR5186-201ENST00000577504 120 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 BRDTP1-201ENST00000605735 677 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 LINC02471-203ENST00000641941 4752 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 SNORA9-201ENST00000384215 133 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 HMGN2P8-201ENST00000391458 268 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AL365396.1-201ENST00000430854 671 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 RPS29P31-201ENST00000446147 164 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC007688.1-201ENST00000475592 759 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 RPL21P12-201ENST00000559810 515 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 AC078899.5-201ENST00000612475 178 ntBASIC3.43□□□□□ -1.86
CCDC88CQ9P219 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC88CQ9P219 PRO1804-201ENST00000623780 2050 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AL356489.2-201ENST00000566968 3528 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC011503.2-201ENST00000594230 1500 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 AC008725.1-201ENST00000605123 2263 ntBASIC3.42□□□□□ -1.86
CCDC88CQ9P219 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC88CQ9P219 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms