Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 SKP1P1-201ENST00000438081 489 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 RPL5P13-201ENST00000462840 709 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 RN7SL323P-201ENST00000494712 295 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC010460.1-201ENST00000507087 466 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 RN7SKP83-201ENST00000516512 178 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 IGKV2D-10-201ENST00000520194 281 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 CYCSP30-201ENST00000546447 172 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 PARP1P2-201ENST00000556806 195 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC006960.3-201ENST00000561845 705 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 MTCO2P22-201ENST00000603246 681 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC099669.2-201ENST00000616549 437 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 AC244205.2-202ENST00000635781 342 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 FAM91A3P-201ENST00000456826 2544 ntBASIC3.76□□□□□ -1.81
TREX1Q9NSU2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TREX1Q9NSU2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC066616.2-201ENST00000559334 1481 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 RNA5SP424-201ENST00000390988 115 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 PTP4A1P5-201ENST00000420305 455 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 NIPA2P1-201ENST00000426223 976 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 MOB1AP1-201ENST00000430903 535 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 NUTF2P7-201ENST00000453086 375 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 MTCO3P20-201ENST00000454926 688 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 RN7SL385P-201ENST00000468873 276 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 VN1R105P-201ENST00000486595 910 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC067904.2-201ENST00000517322 1283 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC008676.3-201ENST00000521237 435 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC009101.1-201ENST00000568135 242 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 RN7SL703P-201ENST00000578485 302 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 AC053481.4-201ENST00000583164 216 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 HMGB1P51-201ENST00000605166 638 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 MIR6875-201ENST00000617506 72 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TREX1Q9NSU2 CR381670.1-201ENST00000624291 1693 ntBASIC3.75□□□□□ -1.81
TREX1Q9NSU2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 MIR320B1-201ENST00000390209 79 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC114814.2-201ENST00000419195 485 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC004975.1-201ENST00000428733 208 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC022034.3-201ENST00000471393 478 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 ATG10-AS1-201ENST00000504846 648 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 MIR2116-201ENST00000517221 80 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 IGKV2D-23-201ENST00000518179 286 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC008489.1-201ENST00000524271 483 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 HIGD1AP5-201ENST00000529959 259 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms