Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 AL122126.1-201ENST00000546905 1318 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC233968.1-201ENST00000611212 1300 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 MIR708-201ENST00000390708 88 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 MTND4LP13-201ENST00000425022 298 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC002075.2-201ENST00000425207 252 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC091286.1-201ENST00000431233 461 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 RPS20P1-201ENST00000434853 354 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 HSPD1P21-201ENST00000436541 245 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 Z95327.1-201ENST00000446082 482 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 EIF4A1P11-201ENST00000451239 222 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 FGF7P3-201ENST00000454645 303 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 HMGN1P15-201ENST00000513870 295 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 SNORA70.17-201ENST00000516449 133 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 MIR2114-201ENST00000516645 80 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC026333.2-201ENST00000542164 106 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 DUXAP6-201ENST00000553858 601 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 HNRNPCP4-201ENST00000571636 900 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC006133.1-201ENST00000617106 264 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 AC112200.1-201ENST00000625015 234 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 CYP1D1P-201ENST00000416662 1433 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 AL365440.1-201ENST00000436135 2167 ntBASIC3.76□□□□□ -1.81
CISHQ9NSE2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CISHQ9NSE2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.76□□□□□ -1.81
CISHQ9NSE2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 CRYBB2P1-203ENST00000415709 538 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 OSTCP5-201ENST00000425293 453 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 RPL7P4-203ENST00000430239 730 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 RPS29P31-201ENST00000446147 164 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 NDUFS5P3-201ENST00000450668 321 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 U3.44-201ENST00000458938 192 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 SETP14-201ENST00000497538 873 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 DEFB109D-201ENST00000529497 240 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC103843.2-201ENST00000530523 682 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC141257.3-201ENST00000572906 215 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 MIR7851-201ENST00000610611 160 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC004241.3-201ENST00000611728 517 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 AC067852.7-201ENST00000623270 535 ntBASIC3.75□□□□□ -1.81
CISHQ9NSE2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.75□□□□□ -1.81
CISHQ9NSE2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CISHQ9NSE2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CISHQ9NSE2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CISHQ9NSE2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC010329.2-201ENST00000595195 2737 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 NMD3P1-201ENST00000439704 1488 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CISHQ9NSE2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CISHQ9NSE2 HSPD1P16-201ENST00000402302 394 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 SEC63P1-201ENST00000425785 1258 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 ATP5JP1-201ENST00000431631 322 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC073063.1-201ENST00000434352 607 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 CASP3P1-201ENST00000446037 609 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 RPL21P23-201ENST00000446654 460 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC037198.2-201ENST00000478845 733 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 IGKV2D-19-201ENST00000523346 262 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC018552.3-201ENST00000567416 561 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 MIR3922-201ENST00000585192 84 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms