Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 SNORA4.1-201ENST00000364263 144 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 MIR92A2-201ENST00000385299 75 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 GLULP6-201ENST00000399502 913 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 RPS3AP23-201ENST00000401762 784 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC244035.1-201ENST00000430042 390 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 B3GNT2P1-201ENST00000434960 952 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 MTND2P40-201ENST00000436718 841 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC005154.2-201ENST00000438110 379 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AL450023.3-201ENST00000440592 271 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 NDUFA5P7-201ENST00000452914 242 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC010326.1-201ENST00000462726 602 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 RN7SL354P-201ENST00000469282 294 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC104685.1-201ENST00000502445 371 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC112198.1-201ENST00000505369 1220 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 MTND4LP31-201ENST00000514859 294 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 RNA5SP392-201ENST00000516905 112 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 AL121766.1-201ENST00000547436 487 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC023161.2-201ENST00000551218 780 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 TRAV15-201ENST00000556680 249 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC138915.2-201ENST00000569776 97 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 MIR5096-201ENST00000583713 70 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC092653.1-201ENST00000608509 531 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AL133243.1-201ENST00000614487 366 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AL049794.2-201ENST00000616301 365 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC092650.2-201ENST00000619984 902 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC008443.7-201ENST00000622195 246 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC098679.4-201ENST00000624241 654 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 OR2L1P-202ENST00000641567 1023 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 AC073869.10-201ENST00000642016 354 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.56□□□□□ -1.52
VTA1Q9NP79 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.56□□□□□ -1.52
VTA1Q9NP79 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VTA1Q9NP79 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 RNU6-500P-201ENST00000362349 107 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 RNU6-251P-201ENST00000363235 104 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 BTF3L4P1-201ENST00000413813 468 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 FCF1P2-201ENST00000415284 583 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 RPL23AP39-201ENST00000415533 405 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 MTCO3P1-205ENST00000422088 832 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 IFNNP1-201ENST00000429219 553 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC068287.1-201ENST00000430283 295 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 NPM1P18-201ENST00000434232 732 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 RPS25P9-201ENST00000435591 252 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC010733.1-201ENST00000451515 401 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 USP9YP10-201ENST00000454868 628 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 RPS5P7-201ENST00000456664 608 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 NCOR1P1-202ENST00000486162 291 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 RPS6P4-201ENST00000494693 758 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 USP9YP5-201ENST00000511770 630 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 MTND5P13-201ENST00000513046 1079 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 SOD1P3-201ENST00000518682 454 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 SMARCE1P4-201ENST00000523647 241 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms