Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC090877.1-201ENST00000561418 344 ntBASIC4.77□□□□□ -1.65
UPF2Q9HAU5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.77□□□□□ -1.65
UPF2Q9HAU5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.77□□□□□ -1.65
UPF2Q9HAU5 AC068620.3-201ENST00000602749 560 ntBASIC4.77□□□□□ -1.65
UPF2Q9HAU5 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UPF2Q9HAU5 AC090617.9-201ENST00000623751 147 ntBASIC4.77□□□□□ -1.65
UPF2Q9HAU5 OR5AC4P-202ENST00000642086 985 ntBASIC4.77□□□□□ -1.65
UPF2Q9HAU5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.77□□□□□ -1.65
UPF2Q9HAU5 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UPF2Q9HAU5 AC073429.2-201ENST00000569694 1444 ntBASIC4.77□□□□□ -1.65
UPF2Q9HAU5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
UPF2Q9HAU5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 ASNSP1-201ENST00000518311 1939 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AL161909.1-201ENST00000397390 712 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC108032.1-201ENST00000416706 207 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 SKP1P1-201ENST00000438081 489 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC009263.1-201ENST00000441193 1239 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 TRBV12-2-201ENST00000489763 344 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC106872.2-201ENST00000494303 480 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 GTF2IP9-201ENST00000502460 301 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 TRAV31-201ENST00000502780 342 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC021146.1-201ENST00000511202 716 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC090819.1-201ENST00000523800 1111 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 HAUS1P3-201ENST00000523909 662 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 OR4A12P-201ENST00000530847 918 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC090666.1-201ENST00000578241 445 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AL359715.4-201ENST00000606629 1436 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC112503.2-201ENST00000609005 552 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC007275.1-201ENST00000621243 671 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC015908.5-201ENST00000623289 343 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 AC008725.1-201ENST00000605123 2263 ntBASIC4.76□□□□□ -1.65
UPF2Q9HAU5 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
UPF2Q9HAU5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 RNU6-252P-201ENST00000363232 107 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 RNA5SP447-201ENST00000363749 119 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 RNA5SP399-201ENST00000364003 117 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 MIR1183-201ENST00000408856 89 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AL158825.1-201ENST00000414735 521 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 RPS6P12-201ENST00000432491 726 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC004854.1-201ENST00000440356 349 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC034244.2-201ENST00000514668 858 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AP003066.2-201ENST00000529375 555 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 NPM1P35-201ENST00000533043 868 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 CYCSP29-201ENST00000533731 318 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 PSMB7P1-201ENST00000556349 514 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC006116.5-201ENST00000591936 559 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AL390816.3-201ENST00000604527 1066 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AP004372.1-201ENST00000604842 844 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC145207.9-201ENST00000623802 325 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AC053481.2-202ENST00000582394 1500 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UPF2Q9HAU5 AP002001.2-201ENST00000529025 1469 ntBASIC4.75□□□□□ -1.65
UPF2Q9HAU5 RPS4XP5-202ENST00000449995 1334 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
UPF2Q9HAU5 AC103591.2-201ENST00000265259 766 ntBASIC4.74□□□□□ -1.65
UPF2Q9HAU5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms