Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 PRPS1P1-201ENST00000445305 876 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 TDGF1P1-201ENST00000445734 527 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 OR1H1P-201ENST00000448731 937 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 RPS4XP18-201ENST00000495480 763 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC146944.3-201ENST00000509969 371 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 RNU6-1213P-201ENST00000517075 94 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 OR4P1P-201ENST00000530808 1136 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC022080.3-201ENST00000544433 482 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC008126.1-201ENST00000549019 480 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC096996.1-201ENST00000563813 325 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC023827.2-201ENST00000566880 1061 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL591167.1-201ENST00000607321 456 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL136131.3-201ENST00000607600 188 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 SNORD91A-202ENST00000609620 191 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AL034408.1-201ENST00000637712 664 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 AC110716.2-201ENST00000563865 3945 ntBASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.37□□□□□ -1.39
COL25A1Q9BXS0 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MTND5P7-201ENST00000413558 1798 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 PANDAR-201ENST00000629595 1506 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 SNRPEP3-201ENST00000338402 276 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 Y_RNA.150-201ENST00000363562 102 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 RNU6-289P-201ENST00000364093 107 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 RNU6-730P-201ENST00000383954 104 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AL121972.1-201ENST00000402023 252 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MIR1272-201ENST00000408106 129 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC092634.6-201ENST00000418558 192 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AL022100.1-202ENST00000421214 548 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC006548.1-201ENST00000427470 102 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC105399.1-202ENST00000447303 205 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 RPL7P59-201ENST00000447700 943 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 GAPDHP14-201ENST00000450472 937 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 GEMIN2P1-201ENST00000454246 752 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC100832.1-201ENST00000471945 383 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 RN7SL382P-201ENST00000482631 282 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 RPS21P4-201ENST00000487122 248 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC116655.1-201ENST00000508324 901 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC010201.1-201ENST00000605051 540 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MIR8080-201ENST00000622224 89 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AC007938.1-201ENST00000562524 2902 ntBASIC6.36□□□□□ -1.39
COL25A1Q9BXS0 AP003119.3-201ENST00000566747 4192 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms