Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC090877.1-201ENST00000561418 344 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 ELOCP28-201ENST00000590044 317 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC006116.5-201ENST00000591936 559 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 IPO5P1-202ENST00000600039 287 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC234771.5-201ENST00000600161 514 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC068790.4-201ENST00000602474 263 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 PSMA6P4-201ENST00000603247 718 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC018618.2-201ENST00000604770 446 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 ARF4P1-201ENST00000605447 541 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AC091905.1-201ENST00000624400 311 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 LINC00561-201ENST00000565815 2738 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 AL049555.1-201ENST00000562834 1933 ntBASIC3.29□□□□□ -1.88
HDHD3Q9BSH5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC005261.4-201ENST00000600047 1385 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 SNORD56.4-201ENST00000363883 71 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 RNU6-1279P-201ENST00000383917 103 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 RNU6-317P-201ENST00000384031 107 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 HSPE1P8-201ENST00000406997 288 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 RNU2-6P-201ENST00000411404 190 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL512637.2-201ENST00000431287 1256 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL356276.2-201ENST00000435919 558 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 MTND2P8-201ENST00000450555 1025 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 CYCSP42-201ENST00000450823 238 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 RN7SL459P-201ENST00000481078 302 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 RPL21P47-201ENST00000483696 477 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC105137.1-201ENST00000484355 562 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC007686.1-201ENST00000488511 463 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC091167.1-201ENST00000492017 396 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC093840.1-201ENST00000511599 336 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC087369.1-201ENST00000520775 996 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 CYCSP29-201ENST00000533731 318 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 HNRNPCP4-201ENST00000571636 900 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 MIR4277-201ENST00000578298 84 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 RN7SL600P-201ENST00000581811 299 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL390816.3-201ENST00000604527 1066 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC007423.1-201ENST00000605009 627 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC091167.4-201ENST00000605079 184 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 FRG1HP-204ENST00000617940 757 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC253576.2-201ENST00000618815 580 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 MIR8059-201ENST00000620427 81 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC010608.2-201ENST00000624830 470 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 MIR6715B-201ENST00000637172 77 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.28□□□□□ -1.88
HDHD3Q9BSH5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 HLFP1-201ENST00000402375 499 ntBASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 HMGB1P13-201ENST00000406019 642 ntBASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 AL445183.3-201ENST00000414168 502 ntBASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 LINC01881-201ENST00000416103 412 ntBASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 AL592293.2-201ENST00000422292 996 ntBASIC3.27□□□□□ -1.89
HDHD3Q9BSH5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms