Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 UBE2V1P1-201ENST00000430836 445 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX3Q99909 EXTL2P1-201ENST00000446218 416 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 ATP5G1P3-201ENST00000463301 410 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 RPS27P23-201ENST00000487608 251 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC026414.1-201ENST00000504046 698 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX3Q99909 TMEM248P1-201ENST00000510579 951 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 IGKV1-32-201ENST00000519290 311 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC137768.1-201ENST00000549998 553 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 AL121834.1-201ENST00000572284 509 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC017100.2-201ENST00000584628 355 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC022726.1-201ENST00000587475 207 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX3Q99909 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.89□□□□□ -1.79
SSX3Q99909 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC073091.2-201ENST00000603205 907 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 VN1R74P-201ENST00000613259 503 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSX3Q99909 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSX3Q99909 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSX3Q99909 MTND4P9-201ENST00000507819 1346 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC016588.2-201ENST00000632484 3021 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC025031.4-201ENST00000621248 3271 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SSX3Q99909 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 HSPD1P14-201ENST00000432666 1618 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX3Q99909 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
SSX3Q99909 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSX3Q99909 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX3Q99909 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SSX3Q99909 RNA5SP443-201ENST00000363083 132 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 MIR192-201ENST00000384915 110 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 U3.30-201ENST00000391308 210 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 RPS16P5-201ENST00000406501 404 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX3Q99909 RN7SKP216-201ENST00000411050 312 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX3Q99909 AL590139.1-201ENST00000416267 400 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 BX510359.2-201ENST00000417920 305 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 PAICSP7-201ENST00000419829 962 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX3Q99909 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSX3Q99909 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX3Q99909 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX3Q99909 CEACAMP9-201ENST00000442990 513 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX3Q99909 RPL9P32-201ENST00000464118 620 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 RN7SL738P-201ENST00000470264 297 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC011005.3-201ENST00000491624 395 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC069306.1-201ENST00000507006 843 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX3Q99909 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX3Q99909 AC119751.1-201ENST00000513357 765 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX3Q99909 AP006289.1-201ENST00000538089 277 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 MTCYBP28-201ENST00000566728 1132 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 MIR4330-201ENST00000579077 105 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 BPTFP1-201ENST00000579209 492 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 SLC25A36P1-201ENST00000590111 465 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX3Q99909 AC011453.2-201ENST00000603737 729 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AL022401.1-201ENST00000619498 108 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 MIR6853-201ENST00000619642 74 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC103858.2-201ENST00000621471 543 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC012414.7-202ENST00000622705 1090 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX3Q99909 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX3Q99909 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX3Q99909 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SSX3Q99909 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX3Q99909 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 AC011978.2-201ENST00000569835 2054 ntBASIC3.88□□□□□ -1.79
SSX3Q99909 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX3Q99909 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX3Q99909 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms