Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 RPL36AP10-201ENST00000421785 322 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP88Q99567 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP88Q99567 AC234781.2-201ENST00000426370 994 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP88Q99567 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP88Q99567 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 AL354941.1-201ENST00000438600 464 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 RAB11AP1-201ENST00000442978 646 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AL591363.1-201ENST00000450091 483 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 Z99714.1-201ENST00000450463 807 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AL133217.1-201ENST00000450980 425 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 AC002553.2-201ENST00000453217 340 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP88Q99567 RPL5P24-201ENST00000463742 885 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP88Q99567 RPL7P18-201ENST00000478965 734 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 BET1P1-201ENST00000482276 359 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP88Q99567 AC010587.2-201ENST00000511727 448 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP88Q99567 MRPS33P3-201ENST00000513456 322 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 RNU1-6P-201ENST00000516290 144 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.51□□□□□ -1.53
NUP88Q99567 SMARCE1P4-201ENST00000523647 241 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP88Q99567 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 RN7SL652P-201ENST00000577769 300 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 VN1R82P-201ENST00000601481 356 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 AL109653.1-201ENST00000603091 248 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 AL354760.1-201ENST00000608357 643 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.51□□□□□ -1.53
NUP88Q99567 OR8B1P-202ENST00000641132 1178 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP88Q99567 AC107068.1-201ENST00000563286 4218 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NUP88Q99567 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP88Q99567 AC139713.2-214ENST00000642059 1811 ntBASIC5.51□□□□□ -1.53
NUP88Q99567 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP88Q99567 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 AP000776.1-201ENST00000530032 1663 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NUP88Q99567 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP88Q99567 KARSP3-201ENST00000571212 1504 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP88Q99567 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NUP88Q99567 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 OR4K15-201ENST00000305051 1216 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 RNU6-492P-201ENST00000363035 104 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP88Q99567 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NUP88Q99567 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NUP88Q99567 RPS3AP23-201ENST00000401762 784 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 PRRC2CP1-201ENST00000404428 159 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 GNG5P5-201ENST00000420444 220 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP88Q99567 AL365338.1-201ENST00000422282 858 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 RPL7P44-201ENST00000424827 742 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 RPL18P10-201ENST00000425606 538 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP88Q99567 AL031736.2-201ENST00000426573 787 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 RPS26P47-201ENST00000427219 348 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 SKP1P3-201ENST00000429280 487 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AL451139.1-201ENST00000434718 346 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 Z83846.1-201ENST00000446798 265 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP88Q99567 AC104689.1-201ENST00000473356 768 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP88Q99567 UBA52P3-201ENST00000491303 382 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC021146.8-201ENST00000507455 733 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP88Q99567 AC010486.3-201ENST00000511602 785 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.5□□□□□ -1.53
NUP88Q99567 Y_RNA.719-201ENST00000517156 106 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.5□□□□□ -1.53
NUP88Q99567 AC008015.1-201ENST00000555505 465 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC093519.1-201ENST00000566109 298 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC022069.1-201ENST00000582910 658 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP88Q99567 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP88Q99567 AC008687.2-201ENST00000597865 520 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 RPL12P25-202ENST00000598100 674 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC096553.1-201ENST00000605169 829 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.5□□□□□ -1.53
NUP88Q99567 AC083809.1-201ENST00000615051 472 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC012414.7-202ENST00000622705 1090 ntBASIC5.5□□□□□ -1.53
NUP88Q99567 AC015871.5-202ENST00000623252 701 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms