Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AP000255.1-201ENST00000610276 676 ntBASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AL133477.1-201ENST00000457472 514 ntBASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC068020.1-201ENST00000594215 661 ntBASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC233981.1-201ENST00000423224 461 ntBASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 AC231759.1-201ENST00000616455 597 ntBASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 A2MP1-204ENST00000566278 4130 ntBASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.9□□□□□ -1.95
CSMD1Q96PZ7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC097504.1-201ENST00000515103 2415 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AL445529.1-201ENST00000398713 389 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 SDCBPP2-201ENST00000424643 885 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 KCTD9P3-201ENST00000434597 1169 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 TPTE2P3-201ENST00000441562 1189 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 VN1R40P-201ENST00000455196 941 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC058791.1-201ENST00000608412 3198 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 SEPT7P8-201ENST00000413308 775 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AL139281.1-201ENST00000422120 335 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 ISCA1P6-201ENST00000427740 390 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AL035407.1-201ENST00000429211 571 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC108022.1-201ENST00000493466 478 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC105227.2-201ENST00000615075 605 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 NCOA4P2-201ENST00000340589 1813 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AL356274.2-201ENST00000624379 3752 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 Y_RNA.226-201ENST00000364337 114 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 U3.12-201ENST00000364498 214 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 SNORA70B-201ENST00000384210 135 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AL353705.1-201ENST00000433468 480 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 NDUFB1P1-201ENST00000435191 180 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 HLA-N-201ENST00000437516 135 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 ATP5C1P1-201ENST00000441945 895 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 RPL7P47-201ENST00000497299 556 ntBASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.89□□□□□ -1.95
CSMD1Q96PZ7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 AL603825.1-201ENST00000438481 80 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 RPS17P11-201ENST00000474297 293 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 RPS4XP13-201ENST00000483219 789 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 AC006557.5-201ENST00000603126 811 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 AC245100.7-201ENST00000609678 442 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 OR51C1P-202ENST00000641159 1444 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms