Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 HIGD1AP8-201ENST00000453927 274 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 UBFD1P1-201ENST00000473259 814 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC010301.1-201ENST00000473936 355 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC013356.1-201ENST00000489027 564 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC034159.1-201ENST00000513885 583 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 RNU6-1003P-201ENST00000517099 105 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AP003034.1-201ENST00000534621 422 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC090424.1-201ENST00000535243 736 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 H3F3BP2-201ENST00000583907 357 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AL391646.1-201ENST00000603860 190 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC064836.2-201ENST00000609491 462 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AP005431.1-201ENST00000618479 319 ntBASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PTCHD1Q96NR3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC005224.3-201ENST00000584683 2140 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RNU6-984P-201ENST00000363236 109 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RNA5SP284-201ENST00000384547 118 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 JKAMPP1-201ENST00000413804 919 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC008280.1-201ENST00000418851 412 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RAD23BP1-201ENST00000421404 1227 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AL513185.2-201ENST00000425543 193 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RSU1P2-202ENST00000437884 485 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 ACTR3P2-201ENST00000439585 1257 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RPL31P15-201ENST00000449770 338 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC005229.2-201ENST00000456995 399 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 EIF3LP3-201ENST00000495197 822 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 RNU6-1281P-201ENST00000516223 105 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 Y_RNA.672-201ENST00000516289 104 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 CENPUP1-201ENST00000526649 1202 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC034268.2-201ENST00000571784 482 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC007038.2-201ENST00000608095 740 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AL136295.6-201ENST00000610486 658 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC126177.8-201ENST00000618339 1015 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AL732618.1-201ENST00000623251 301 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AP002907.1-201ENST00000606361 1430 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 AC015799.1-201ENST00000622996 3122 ntBASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PTCHD1Q96NR3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms