Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 IGKV2-19-201ENST00000518132 283 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 IGHV3-57-201ENST00000520143 280 ntBASIC6.91□□□□□ -1.3
HLA-CQ95604 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.91□□□□□ -1.3
HLA-CQ95604 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.91□□□□□ -1.3
HLA-CQ95604 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.91□□□□□ -1.3
HLA-CQ95604 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HLA-CQ95604 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HLA-CQ95604 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.91□□□□□ -1.3
HLA-CQ95604 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-CQ95604 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HLA-CQ95604 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-CQ95604 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
HLA-CQ95604 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-CQ95604 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-CQ95604 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-CQ95604 AC122713.2-201ENST00000624942 3335 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-CQ95604 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-CQ95604 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
HLA-CQ95604 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-CQ95604 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
HLA-CQ95604 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-CQ95604 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-CQ95604 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-CQ95604 SNORA70.3-201ENST00000365075 132 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 Y_RNA.447-201ENST00000384184 113 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 MIR19A-201ENST00000384878 82 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 Y_RNA.645-201ENST00000391229 102 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AL049697.2-201ENST00000403708 294 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 RNU6-387P-201ENST00000411331 105 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-CQ95604 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-CQ95604 RAC1P6-201ENST00000423911 575 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 PPIAP13-201ENST00000434706 478 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 FTH1P1-201ENST00000437933 532 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-CQ95604 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-CQ95604 AL136038.1-201ENST00000497246 351 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 FTH1P8-201ENST00000498161 514 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-CQ95604 RNU6-1213P-201ENST00000517075 94 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 CYCSP22-201ENST00000517555 339 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-CQ95604 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.9□□□□□ -1.3
HLA-CQ95604 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.9□□□□□ -1.3
HLA-CQ95604 MIR4489-201ENST00000578869 62 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 CTSLP2-201ENST00000580501 394 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.9□□□□□ -1.3
HLA-CQ95604 AC004805.2-201ENST00000605382 482 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC243654.2-201ENST00000612843 443 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC141273.2-201ENST00000618989 130 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC078938.1-201ENST00000620993 318 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC243312.2-201ENST00000623340 601 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 AC055839.1-201ENST00000634467 498 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HLA-CQ95604 AC245505.2-201ENST00000553572 3055 ntBASIC6.9□□□□□ -1.3
HLA-CQ95604 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.9□□□□□ -1.3
HLA-CQ95604 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HLA-CQ95604 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.9□□□□□ -1.31
HLA-CQ95604 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
HLA-CQ95604 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.9□□□□□ -1.31
HLA-CQ95604 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
HLA-CQ95604 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
HLA-CQ95604 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
HLA-CQ95604 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
HLA-CQ95604 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.9□□□□□ -1.31
HLA-CQ95604 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.9□□□□□ -1.31
HLA-CQ95604 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.9□□□□□ -1.31
HLA-CQ95604 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
HLA-CQ95604 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-CQ95604 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-CQ95604 AC011755.1-201ENST00000623763 2049 ntBASIC6.89□□□□□ -1.31
HLA-CQ95604 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.89□□□□□ -1.31
HLA-CQ95604 AC244517.1-201ENST00000606030 2086 ntBASIC6.89□□□□□ -1.31
HLA-CQ95604 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
HLA-CQ95604 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.89□□□□□ -1.31
HLA-CQ95604 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.89□□□□□ -1.31
HLA-CQ95604 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-CQ95604 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HLA-CQ95604 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
HLA-CQ95604 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HLA-CQ95604 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.89□□□□□ -1.31
HLA-CQ95604 Y_RNA.389-201ENST00000383924 113 ntBASIC6.89□□□□□ -1.31
HLA-CQ95604 Y_RNA.428-201ENST00000384078 102 ntBASIC6.89□□□□□ -1.31
HLA-CQ95604 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HLA-CQ95604 RNU6-278P-201ENST00000390945 109 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms