Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.27□□□□□ -1.89
AP3S1Q92572 AC008011.1-201ENST00000545989 227 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 AC004024.1-201ENST00000549244 247 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.27□□□□□ -1.89
AP3S1Q92572 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S1Q92572 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.27□□□□□ -1.89
AP3S1Q92572 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.27□□□□□ -1.89
AP3S1Q92572 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S1Q92572 AC234771.5-201ENST00000600161 514 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 AC091167.4-201ENST00000605079 184 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.27□□□□□ -1.89
AP3S1Q92572 AC068870.2-201ENST00000620635 389 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 AC018816.2-201ENST00000621460 353 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 AC110801.1-201ENST00000623590 212 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.27□□□□□ -1.89
AP3S1Q92572 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.27□□□□□ -1.89
AP3S1Q92572 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.27□□□□□ -1.89
AP3S1Q92572 AL157700.1-201ENST00000561973 1432 ntBASIC3.27□□□□□ -1.89
AP3S1Q92572 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S1Q92572 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
AP3S1Q92572 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
AP3S1Q92572 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S1Q92572 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S1Q92572 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S1Q92572 AL513302.2-201ENST00000562313 1842 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.26□□□□□ -1.89
AP3S1Q92572 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S1Q92572 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S1Q92572 RNU6-356P-201ENST00000384140 107 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
AP3S1Q92572 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S1Q92572 RPS29P17-201ENST00000430795 166 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3S1Q92572 MTND2P28-201ENST00000457540 1044 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 RPS4XP2-201ENST00000458402 793 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 RPS27P29-201ENST00000463110 252 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 AC092754.2-201ENST00000463506 460 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3S1Q92572 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.26□□□□□ -1.89
AP3S1Q92572 PTGES3P3-201ENST00000511479 482 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.26□□□□□ -1.89
AP3S1Q92572 OR8G5-201ENST00000524943 1041 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 AP001922.4-201ENST00000526967 290 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3S1Q92572 AP005901.4-201ENST00000577336 569 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 MIR4489-201ENST00000578869 62 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 KPNA2P3-201ENST00000584190 848 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 AC010928.3-201ENST00000587712 541 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.26□□□□□ -1.89
AP3S1Q92572 RPL12P25-202ENST00000598100 674 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S1Q92572 AC068790.7-201ENST00000602347 528 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.26□□□□□ -1.89
AP3S1Q92572 AC099778.2-201ENST00000610904 211 ntBASIC3.26□□□□□ -1.89
AP3S1Q92572 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.26□□□□□ -1.89
AP3S1Q92572 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3S1Q92572 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S1Q92572 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S1Q92572 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
AP3S1Q92572 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.26□□□□□ -1.89
AP3S1Q92572 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S1Q92572 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
AP3S1Q92572 AL672296.1-201ENST00000427780 2158 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S1Q92572 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S1Q92572 RNU1-132P-201ENST00000364300 164 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 RN7SKP15-201ENST00000364742 309 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 RNA5SP97-201ENST00000365006 84 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
AP3S1Q92572 RNU11-4P-201ENST00000391149 133 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 RNA5SP107-201ENST00000411358 122 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 TPT1P2-201ENST00000413105 503 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.25□□□□□ -1.89
AP3S1Q92572 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 AC017079.2-201ENST00000416102 485 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 AC245291.1-201ENST00000419501 328 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3S1Q92572 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S1Q92572 AL031736.2-201ENST00000426573 787 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 RPS27AP12-201ENST00000429552 465 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 MTCO1P43-201ENST00000431831 488 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 SNORA71B-202ENST00000439232 272 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S1Q92572 SLC31A1P1-201ENST00000451221 567 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.25□□□□□ -1.89
AP3S1Q92572 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 RN7SL101P-201ENST00000496350 279 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S1Q92572 RNU2-27P-201ENST00000516185 142 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 RN7SKP234-201ENST00000517173 224 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 RPL12P22-201ENST00000519073 490 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S1Q92572 YPEL5P3-201ENST00000547227 352 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S1Q92572 AC027281.1-201ENST00000574178 758 ntBASIC3.25□□□□□ -1.89
AP3S1Q92572 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3S1Q92572 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S1Q92572 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S1Q92572 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
AP3S1Q92572 AC022079.2-201ENST00000619739 566 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms