Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 BTF3P13-201ENST00000513224 490 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 MIR2117-201ENST00000516780 80 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 Y_RNA.711-201ENST00000516993 102 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC021678.3-201ENST00000517893 476 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 NRBF2P1-201ENST00000587407 859 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC245014.2-201ENST00000603689 287 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 SUMO2P15-201ENST00000604285 278 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC246785.4-201ENST00000605374 287 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC068722.2-201ENST00000618734 544 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC069234.4-201ENST00000621276 412 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC119674.1-207ENST00000641355 633 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC078880.4-201ENST00000617627 1749 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC024560.2-201ENST00000507981 1497 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AP002907.1-201ENST00000606361 1430 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC011155.1-201ENST00000316512 456 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 RNU2-39P-201ENST00000410604 198 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 Y_RNA.608-201ENST00000410647 95 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 GAPDHP49-201ENST00000421421 961 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 BMS1P19-201ENST00000433925 393 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 SEPT14P3-201ENST00000439401 183 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 Z98949.2-201ENST00000440996 144 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AL163193.1-201ENST00000444895 788 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AL732372.2-207ENST00000445840 183 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 SEPT14P2-201ENST00000453405 183 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 DHFRP3-201ENST00000455595 559 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 SNORD19B-201ENST00000459623 84 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC090096.1-201ENST00000489168 390 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 SEPT14P4-201ENST00000513445 186 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 RN7SKP288-201ENST00000516227 268 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AP003467.2-201ENST00000520175 319 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 FO082796.1-201ENST00000523795 183 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC009268.2-201ENST00000621925 457 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AC000095.2-202ENST00000637415 154 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 MKKS-204ENST00000639674 192 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AL731532.1-201ENST00000623972 4236 ntBASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHKBP1Q8TBC3 CDR1-202ENST00000625883 1485 ntBASIC6.02□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms