Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC133473.1-201ENST00000455173 299 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 IGKV1OR2-1-201ENST00000514060 354 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RN7SKP141-201ENST00000516167 338 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL049844.2-201ENST00000604280 628 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MIR3651-201ENST00000630427 90 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 PRO1804-201ENST00000623780 2050 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ESD-201ENST00000378697 1079 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 SNORA48.5-201ENST00000391143 135 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 LAP3P1-201ENST00000403648 294 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 DUXAP2-201ENST00000519198 589 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 SLC25A36P1-201ENST00000590111 465 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC009229.4-201ENST00000623854 1947 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RNA5SP72-201ENST00000364442 117 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 UBTFL3-201ENST00000418934 1024 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 UBTFL6-201ENST00000477929 1024 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RN7SL809P-201ENST00000482040 297 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC022968.1-201ENST00000567372 442 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC104662.1-201ENST00000604448 511 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 TUG1_1.1-201ENST00000610654 145 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC079298.2-201ENST00000623885 459 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MIR448-201ENST00000362131 111 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RNA5SP104-201ENST00000410989 118 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 FTLP19-201ENST00000433300 394 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 OR52Y1P-201ENST00000452418 828 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RPL36AP13-201ENST00000457490 317 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 BNIP3P41-201ENST00000503774 571 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC090151.1-201ENST00000520784 730 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL137849.1-201ENST00000604767 169 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 U3.45-201ENST00000607547 219 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC090337.1-201ENST00000579651 2074 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MTCO1P45-201ENST00000431457 267 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC080014.1-201ENST00000496877 1201 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 UBE2CP3-201ENST00000502715 450 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 TRAPPC2P2-201ENST00000517589 409 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MIR7154-201ENST00000620673 73 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC006840.1-201ENST00000623069 542 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AL365440.1-201ENST00000436135 2167 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 SUN3-208ENST00000453192 801 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 RPS4XP12-201ENST00000461747 709 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 GOLGA5P1-201ENST00000507317 980 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC011611.1-201ENST00000552179 197 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC013412.1-201ENST00000610687 192 ntBASIC1.13□□□□□ -2.23
SYNE1Q8NF91 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC1.13□□□□□ -2.23
SYNE1Q8NF91 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SYNE1Q8NF91 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC1.12□□□□□ -2.23
SYNE1Q8NF91 RNA5SP51-201ENST00000364750 119 ntBASIC1.12□□□□□ -2.23
SYNE1Q8NF91 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.12□□□□□ -2.23
SYNE1Q8NF91 AL451050.1-201ENST00000450126 415 ntBASIC1.12□□□□□ -2.23
SYNE1Q8NF91 MTND4LP31-201ENST00000514859 294 ntBASIC1.12□□□□□ -2.23
SYNE1Q8NF91 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
SYNE1Q8NF91 IGKV2OR2-8-201ENST00000558710 300 ntBASIC1.12□□□□□ -2.23
SYNE1Q8NF91 AC015726.1-201ENST00000602353 681 ntBASIC1.12□□□□□ -2.23
SYNE1Q8NF91 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.12□□□□□ -2.23
SYNE1Q8NF91 EEF1A1P42-201ENST00000613436 1331 ntBASIC1.12□□□□□ -2.23
SYNE1Q8NF91 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms