Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.47□□□□□ -1.69
RTL9Q8NET4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.47□□□□□ -1.69
RTL9Q8NET4 AC092809.1-201ENST00000441469 474 ntBASIC4.47□□□□□ -1.69
RTL9Q8NET4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.47□□□□□ -1.69
RTL9Q8NET4 RPS29P2-201ENST00000479278 136 ntBASIC4.47□□□□□ -1.69
RTL9Q8NET4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTL9Q8NET4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.47□□□□□ -1.69
RTL9Q8NET4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.47□□□□□ -1.69
RTL9Q8NET4 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.47□□□□□ -1.69
RTL9Q8NET4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTL9Q8NET4 AC006116.10-201ENST00000591836 581 ntBASIC4.47□□□□□ -1.69
RTL9Q8NET4 AC006077.1-201ENST00000604746 343 ntBASIC4.47□□□□□ -1.69
RTL9Q8NET4 MIR7851-201ENST00000610611 160 ntBASIC4.47□□□□□ -1.69
RTL9Q8NET4 AL355365.1-201ENST00000616480 294 ntBASIC4.47□□□□□ -1.69
RTL9Q8NET4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.47□□□□□ -1.69
RTL9Q8NET4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RTL9Q8NET4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RTL9Q8NET4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTL9Q8NET4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTL9Q8NET4 RNA5SP50-201ENST00000363731 107 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 MIR634-201ENST00000385208 97 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 DBIP2-201ENST00000419076 262 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 YWHAEP5-201ENST00000431545 765 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 AL356535.1-201ENST00000440335 398 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 NPM1P39-201ENST00000449818 867 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 RPL5P24-201ENST00000463742 885 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 RN7SL809P-201ENST00000482040 297 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 PDCD5P1-201ENST00000543528 309 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 AC023161.2-201ENST00000551218 780 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 CDY3P-201ENST00000454543 1618 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 MFSD8-233ENST00000641482 4860 ntBASIC4.46□□□□□ -1.7
RTL9Q8NET4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.46□□□□□ -1.7
RTL9Q8NET4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC018529.3-201ENST00000624212 2254 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 Y_RNA.111-201ENST00000363248 100 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 GCNT6-201ENST00000379591 934 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 RN7SKP111-201ENST00000410349 271 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 RNA5SP120-201ENST00000410900 112 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC017083.1-201ENST00000428093 483 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 UBA52P3-201ENST00000491303 382 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 AGGF1P3-201ENST00000493675 1213 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC016550.3-201ENST00000515706 767 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 EIF1P6-201ENST00000600054 334 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 BNIP3P11-201ENST00000603878 563 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC243756.2-201ENST00000618406 463 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC091905.1-201ENST00000624400 311 ntBASIC4.45□□□□□ -1.7
RTL9Q8NET4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.45□□□□□ -1.7
RTL9Q8NET4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTL9Q8NET4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTL9Q8NET4 AC090337.1-201ENST00000579651 2074 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTL9Q8NET4 AC018555.1-201ENST00000567548 1980 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 AC019155.1-201ENST00000382242 574 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 MIR128-1-201ENST00000384921 82 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 RPL23AP48-201ENST00000406913 488 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 OR4K6P-201ENST00000416478 897 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 SYT14P1-201ENST00000481459 721 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 AC010342.1-201ENST00000514047 877 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 AL121766.1-201ENST00000547436 487 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 GTF2IP8-201ENST00000560687 584 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 MIR4727-201ENST00000622232 55 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 AP003499.2-201ENST00000624100 483 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTL9Q8NET4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTL9Q8NET4 AC012020.1-201ENST00000624541 1728 ntBASIC4.44□□□□□ -1.7
RTL9Q8NET4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTL9Q8NET4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTL9Q8NET4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTL9Q8NET4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTL9Q8NET4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RTL9Q8NET4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms