Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC015726.3-201ENST00000624501 418 ntBASIC4.8□□□□□ -1.64
CPEB3Q8NE35 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 MIR3688-2-201ENST00000636963 87 ntBASIC4.8□□□□□ -1.64
CPEB3Q8NE35 AL049767.1-202ENST00000637826 242 ntBASIC4.8□□□□□ -1.64
CPEB3Q8NE35 CRYM-AS1-204ENST00000637983 556 ntBASIC4.8□□□□□ -1.64
CPEB3Q8NE35 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 AC007938.2-201ENST00000604666 2634 ntBASIC4.8□□□□□ -1.64
CPEB3Q8NE35 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPEB3Q8NE35 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RNA5SP453-201ENST00000362503 119 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 Y_RNA.25-201ENST00000362528 102 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RNU6-462P-201ENST00000362659 105 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RNU6-216P-201ENST00000363282 104 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RPS3AP23-201ENST00000401762 784 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC109780.2-201ENST00000413467 845 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 FCF1P2-201ENST00000415284 583 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 Z93019.1-201ENST00000416450 973 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RPS27AP14-201ENST00000422868 454 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC073335.1-201ENST00000427776 363 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 BMS1P19-201ENST00000433925 393 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 MTATP6P30-201ENST00000443540 664 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 PPIAP20-201ENST00000449839 135 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RPL26P28-201ENST00000451325 435 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 SNRPFP4-201ENST00000456366 242 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC041039.1-201ENST00000485656 536 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RN7SL466P-201ENST00000497546 295 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC117522.1-201ENST00000509821 380 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 ARL2BPP6-201ENST00000512757 439 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC114781.4-201ENST00000513707 639 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC027309.2-201ENST00000520566 192 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 HIGD1AP6-201ENST00000521833 279 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 DEFB131D-201ENST00000526803 184 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 OR6C73P-201ENST00000546432 358 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 UBE2FP2-201ENST00000566646 462 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC015720.2-201ENST00000567709 334 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC233280.2-201ENST00000603917 1070 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC104695.2-201ENST00000605056 775 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC092954.2-201ENST00000609103 430 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 DUXAP9-208ENST00000622815 614 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC119744.1-201ENST00000454746 1715 ntBASIC4.79□□□□□ -1.64
CPEB3Q8NE35 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CPEB3Q8NE35 AC079097.1-201ENST00000512187 1399 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 AC092681.1-201ENST00000297369 291 ntBASIC4.78□□□□□ -1.64
CPEB3Q8NE35 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CPEB3Q8NE35 RNA5SP319-201ENST00000362768 119 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms